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IVF0012042 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012042
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRNA-dependent RNA polymerase, mitoviral
Genome locationchr10:19688684..19688983
RNA-Seq ExpressionIVF0012042
SyntenyIVF0012042
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK11283.1 RNA-dependent RNA polymerase, mitoviral [Cucumis melo var. makuwa]4.97e-2078.33Show/hide
Query:  KCIVSQEELLNPKEDLQRVPPPLYTTVHIFKKEDVHLACKPQNPRIPKSSKELKRRLEVE
        KCIV QEE LN KEDLQ VPP  YT +HIFK+EDVHLACKP+N RI K SKELKRRLEVE
Subjt:  KCIVSQEELLNPKEDLQRVPPPLYTTVHIFKKEDVHLACKPQNPRIPKSSKELKRRLEVE
TrEMBL top hitse value%identityAlignment
A0A5D3CHB7 RNA-dependent RNA polymerase, mitoviral3.8e-1672.31Show/hide
Query:  KCIVSQEELLNPKEDLQRVPPPLYTTVHIFKKEDVHLACKPQNPRIPKSSKELKRRLEVEVRRKM
        KCIV QEE LN KEDLQ VPP  YT +HIFK+EDVHLACKP+N RI K SKELKRRLEVE  + +
Subjt:  KCIVSQEELLNPKEDLQRVPPPLYTTVHIFKKEDVHLACKPQNPRIPKSSKELKRRLEVEVRRKM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACCTATTATCCTCTCGCCACTTTCTAAATCCCCCATCATCATAACAACATCCTCCAACTCGCGACCTAACCTTAATAAGCCCTTACTTGATCAAAAGTGCATTGT
TAGCCAAGAAGAACTCCTTAACCCTAAGGAAGATTTGCAACGCGTTCCTCCCCCTTTATACACTACTGTTCATATTTTCAAGAAGGAAGACGTGCATCTCGCTTGTAAAC
CTCAAAACCCAAGAATCCCTAAGTCATCTAAGGAACTCAAGAGGAGATTAGAGGTTGAGGTTAGAAGAAAGATGGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTACCTATTATCCTCTCGCCACTTTCTAAATCCCCCATCATCATAACAACATCCTCCAACTCGCGACCTAACCTTAATAAGCCCTTACTTGATCAAAAGTGCATTGT
TAGCCAAGAAGAACTCCTTAACCCTAAGGAAGATTTGCAACGCGTTCCTCCCCCTTTATACACTACTGTTCATATTTTCAAGAAGGAAGACGTGCATCTCGCTTGTAAAC
CTCAAAACCCAAGAATCCCTAAGTCATCTAAGGAACTCAAGAGGAGATTAGAGGTTGAGGTTAGAAGAAAGATGGTCTAA
Protein sequenceShow/hide protein sequence
MLPIILSPLSKSPIIITTSSNSRPNLNKPLLDQKCIVSQEELLNPKEDLQRVPPPLYTTVHIFKKEDVHLACKPQNPRIPKSSKELKRRLEVEVRRKMV