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IVF0012043 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012043
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionBeta-galactosidase
Genome locationchr04:24838868..24839080
RNA-Seq ExpressionIVF0012043
SyntenyIVF0012043
Gene Ontology termsGO:0001522 - pseudouridine synthesis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0009982 - pseudouridine synthase activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041669.1 DNA polymerase theta [Cucumis melo var. makuwa]2.96e-4194.29Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
        MFLEGRHKFSFLTGGTVRPLPGDALERLWK EDSLTRSMLINSMEPQ+ KPLLYAATAKDLWDTTQT YS
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
KAA0051252.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]2.47e-3890Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
        MFLEGRHKF FL+GGTVR LPGDAL+RLWKGEDSLTRSMLINSMEPQ+GKPLLYAA  KDLWDTTQTLYS
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
KAA0051293.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]6.73e-3991.43Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
        MFLEGRHKFSFLTG TVRPLPGDALERLWK EDSLTRSMLIN+MEPQ+ KPLLYAATAKDLWDTTQT YS
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
KAA0053589.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]1.06e-3690Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
        MFLEGRH+F FLTG TVRP PGDALERLWKGEDSL RSMLINSMEPQ+GKPLLYAAT KDLWDTTQTLYS
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
KAA0066678.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]9.24e-3690Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
        MFLEGRH+F FLTGGTVRPLPGDALERLWKGEDSL RSMLINSMEPQ+ KPLL  ATAKDLWDTTQTLYS
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
TrEMBL top hitse value%identityAlignment
A0A5A7TJX7 DNA polymerase theta3.3e-3094.29Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
        MFLEGRHKFSFLTGGTVRPLPGDALERLWK EDSLTRSMLINSMEPQ+ KPLLYAATAKDLWDTTQT YS
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
A0A5A7U5W5 UBN2_3 domain-containing protein1.1e-2890Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
        MFLEGRHKF FL+GGTVR LPGDAL+RLWKGEDSLTRSMLINSMEPQ+GKPLLYAA  KDLWDTTQTLYS
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
A0A5A7U5Z0 Cysteine-rich RLK (RECEPTOR-like protein kinase) 86.2e-2991.43Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
        MFLEGRHKFSFLTG TVRPLPGDALERLWK EDSLTRSMLIN+MEPQ+ KPLLYAATAKDLWDTTQT YS
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
A0A5A7UJF3 UBN2_3 domain-containing protein1.4e-2890Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
        MFLEGRH+F FLTG TVRP PGDALERLWKGEDSL RSMLINSMEPQ+GKPLLYAAT KDLWDTTQTLYS
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS
A0A5A7V0I4 Putative tRNA pseudouridine synthase1.1e-2891.3Show/hide
Query:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLY
        MFLEGRH+F FLTG TVRP PGDALERLWKGEDSL RSMLINSMEPQ+GKPLLYAATAKDLWDTTQTLY
Subjt:  MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1.8e-0427.94Show/hide
Query:  FLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLY
        FL    KF F+ G   +P P   L + W+  +++    L+NSM  ++ + ++YA TA  +W+  + ++
Subjt:  FLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTCGAAGGTCGCCACAAGTTCAGCTTCTTAACTGGAGGGACTGTACGTCCTCTACCAGGAGACGCCTTGGAACGACTTTGGAAAGGGGAGGACTCACTTACTCG
GTCCATGTTGATTAATAGTATGGAACCACAAATGGGCAAGCCTCTACTATATGCTGCCACAGCAAAAGATTTATGGGATACAACTCAAACCCTTTACTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCTCGAAGGTCGCCACAAGTTCAGCTTCTTAACTGGAGGGACTGTACGTCCTCTACCAGGAGACGCCTTGGAACGACTTTGGAAAGGGGAGGACTCACTTACTCG
GTCCATGTTGATTAATAGTATGGAACCACAAATGGGCAAGCCTCTACTATATGCTGCCACAGCAAAAGATTTATGGGATACAACTCAAACCCTTTACTCGTAA
Protein sequenceShow/hide protein sequence
MFLEGRHKFSFLTGGTVRPLPGDALERLWKGEDSLTRSMLINSMEPQMGKPLLYAATAKDLWDTTQTLYS