CuGenDBv2

Gene ID	IVF0012048
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	40S ribosomal protein S29-like
Genome location	chr07:24225766..24227541
RNA-Seq Expression	IVF0012048
Synteny	IVF0012048
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001209 - Ribosomal protein S14 IPR039744 - 40S ribosomal protein S29/30S ribosomal protein S14 type Z IPR043140 - Ribosomal protein S14/S29

Homology

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GenBank top hits

e value

%identity

Alignment

XP_002271801.1 PREDICTED: 40S ribosomal protein S29 [Vitis vinifera]

2.66e-38

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_011078121.1 40S ribosomal protein S29 [Sesamum indicum]

3.78e-38

98.21

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSN+WNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_015866898.1 40S ribosomal protein S29 [Ziziphus jujuba]

5.37e-38

98.21

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYG+MCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_015866899.1 40S ribosomal protein S29 [Ziziphus jujuba]

5.37e-38

98.21

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_024440496.1 40S ribosomal protein S29 isoform X2 [Populus trichocarpa]

7.63e-38

96.43

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSN+WNSHPKNYGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BZQ2 40S ribosomal protein S29

9.4e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A1S3V2W1 40S ribosomal protein S29

9.4e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A2G9HKH9 40S ribosomal protein S29

9.4e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A2P5DND1 Ribosomal protein

9.4e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A6J5Y987 Uncharacterized protein

9.4e-28

100

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

SwissProt top hits

e value

%identity

Alignment

Q4PM47 40S ribosomal protein S29

3.8e-18

70.37

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGH N+W SHP+ YGPGSR CRVC N HGLIRKYGL  CR+CFR  A +IGF K
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q5I7K3 40S ribosomal protein S29

5.9e-27

91.07

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYG GSR CRVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Q680P8 40S ribosomal protein S29

3.4e-27

92.86

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Q757G1 40S ribosomal protein S29

6.5e-18

69.64

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        M H NVW SHP+NYG GSR CRVC +  GLIRKYGL  CRQCFR  A +IGF KYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Q7XYB0 40S ribosomal protein S29

2.4e-20

69.64

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGH N+W SHP+ YG GSR+C++CGN HGLIRKY +  CRQCFR  AK+IGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Arabidopsis top hits

e value

%identity

Alignment

AT3G43980.1 Ribosomal protein S14p/S29e family protein

2.4e-28

92.86

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

AT3G44010.1 Ribosomal protein S14p/S29e family protein

2.4e-28

92.86

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

AT4G33865.1 Ribosomal protein S14p/S29e family protein

2.4e-28

92.86

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Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Sequences

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CDS sequence

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ATGGGGCACTCCAACGTTTGGAACTCTCATCCTAAGAACTATGGCCCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTAT
GTGTTGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGTACCGCTAA

mRNA sequence

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AGAAATTAGGGTTTATCTTGTATAAAACACGCTTTTGCCGCCTTCTCCTATCTCACCAAATTTTGTGCCGTCTTCGCATTGTGATTTCGAAGCATCTCAATACCCTCACA
ATCATGGGGCACTCCAACGTTTGGAACTCTCATCCTAAGAACTATGGCCCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACT
TATGTGTTGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGTACCGCTAAGAAGCTAATTATCCCTAGAAGAGAGAATGGGTTGAATTTATATTGA
AGAACGTTTCCCATGTTTTGCTTTTGTTTACTCCGTATGGAATATGAAGTGATTGTTAGAAGACGTTTTTGACACTTTTGTTCTGAACATTTAAAGTTTCTTAATTGAGC
TTCTTGAGATTATTTTGACATATATTCCTTCTATTATTATTTTTAAGTTCTTAAGCATGCTTGATGTTGTGTCACCTTGTCAGTTTAGGAAGTGGAGGGTTTAGGCTATA
TGGTATTGTTAATCAGTTTGTGATTGTAGTTAAACTAATTACTAGACTGTGTCTTAATTCCTTTAGTCTCTAAATTTTTTTATGGAGCGTAGTTGAGCACGTGAGCCTTG
AAAAAAGTATCATTTCCCACTCTATGCAATAATACAATACCG

Protein sequence

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MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

IVF0012048 (gene) of Melon (IVF77) v1 genome