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IVF0012058 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012058
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionchaperonin-like RBCX protein 1, chloroplastic
Genome locationchr08:2589566..2590728
RNA-Seq ExpressionIVF0012058
SyntenyIVF0012058
Gene Ontology termsGO:0006270 - DNA replication initiation (biological process)
GO:0009409 - response to cold (biological process)
GO:0009414 - response to water deprivation (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0015977 - carbon fixation (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0110102 - chloroplast ribulose bisphosphate carboxylase complex assembly (biological process)
GO:0033314 - mitotic DNA replication checkpoint (biological process)
GO:0061077 - chaperone-mediated protein folding (biological process)
GO:0005664 - nuclear origin of replication recognition complex (cellular component)
GO:0009534 - chloroplast thylakoid (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0003688 - DNA replication origin binding (molecular function)
InterPro domainsIPR038052 - Chaperonin-like RbcX superfamily
IPR003435 - Chaperonin-like RbcX


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134778.1 chaperonin-like RBCX protein 1, chloroplastic [Cucumis sativus]4.13e-11797.11Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPS+FSLPNLNRGNVFPVRPIKPRA K MRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLAFKMV ESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

XP_008440039.1 PREDICTED: uncharacterized protein LOC103484635 [Cucumis melo]1.82e-120100Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

XP_023003335.1 chaperonin-like RBCX protein 1, chloroplastic [Cucurbita maxima]4.95e-10286.71Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MES ARILSPT FPS+F LPNLNR N  PV P KP ASKS+RLHC KMYVPGFGEASPE+KAA+NLHNFFTYVAVRIVTAQLESYNPEA+ ELMEFLDRH
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        SLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KMVGESNTR+MREY+TETSP D EK
Subjt:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

XP_023518339.1 chaperonin-like RBCX protein 1, chloroplastic [Cucurbita pepo subsp. pepo]7.04e-10286.71Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MES ARILSPT FPS+F LPNLNR N  PV P KP ASKS+RLHC KMYVPGFGEASPE+KAA+NLHNFFTYVAVRIVTAQLESYNPEA+ ELMEFLDRH
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        SLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KMVGESNTR+MREY+TETSP D EK
Subjt:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

XP_038881664.1 chaperonin-like RBCX protein 1, chloroplastic isoform X1 [Benincasa hispida]1.05e-11092.49Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        ME SARILS TQFPS+F LPNLNR NVFPV P KP+A+KSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAY ELMEFLDRH
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMV ESNTR+MREY+TETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

TrEMBL top hitse value%identityAlignment
A0A0A0KMZ4 Uncharacterized protein2.7e-8997.11Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPS+FSLPNLNRGNVFPVRPIKPRA K MRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHK+LALRILEVRSAYCKNDFEWDNLKRLAFKMV ESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

A0A1S3B054 uncharacterized protein LOC1034846357.5e-92100Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

A0A5D3CNU4 Chaperonin-like RBCX protein 17.5e-92100Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
Subjt:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

A0A6J1BTL5 chaperonin-like RBCX protein 1, chloroplastic1.8e-7784.57Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASK--SMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLD
        MESSAR+LSPTQFPS+F LPNLNR  VFP+ P KP+ASK   ++L C KMYVPGFGEASPE+KAA+NLHNFFTYVAVRIV AQLESYNPEA++ELMEFLD
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASK--SMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLD

Query:  RHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        RHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KM  ESNTR+MREY+TETSPS+TEK
Subjt:  RHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

A0A6J1KRH1 chaperonin-like RBCX protein 1, chloroplastic6.1e-7886.71Show/hide
Query:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH
        MES ARILSPT FPS+F LPNLNR N  PV P KP ASKS+RLHC KMYVPGFGEASPE+KAA+NLHNFFTYVAVRIVTAQLESYNPEA+ ELMEFLDRH
Subjt:  MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRH

Query:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK
        SLNDGDKFL++LMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLA KMVGESNTR+MREY+TETSP D EK
Subjt:  SLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK

SwissProt top hitse value%identityAlignment
A0A0H3K9R3 RuBisCO chaperone RbcX7.4e-0430.69Show/hide
Query:  ARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREY
        AR L N+ TY AV ++  QL   NP     L  F    S  DG+ +LA+L+   +  + L LR++ VR    ++    D L  +    + E+N    R  
Subjt:  ARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREY

Query:  L
        L
Subjt:  L

Q31N04 RuBisCO chaperone RbcX7.4e-0430.69Show/hide
Query:  ARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREY
        AR L N+ TY AV ++  QL   NP     L  F    S  DG+ +LA+L+   +  + L LR++ VR    ++    D L  +    + E+N    R  
Subjt:  ARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREY

Query:  L
        L
Subjt:  L

Q44177 RuBisCO chaperone RbcX5.5e-0732.76Show/hide
Query:  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESN---TR
        + A  L ++ TY AVR+++ QL   NP   + L EF  RH + + D +L ++M E   +K L LRIL VR    +   E+  L  +    + +SN    R
Subjt:  KAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESN---TR

Query:  IMREYLTETSPSDTEK
         + E LT+   S T++
Subjt:  IMREYLTETSPSDTEK

Q55670 RuBisCO chaperone RbcX7.4e-0433.65Show/hide
Query:  LHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESN---TRIMREY
        L ++ TY AV  + ++L   NP   + L ++L  HS+ +G+ FL  L+ E   +K L LRIL VR    ++    D L  +    + ESN    R + E 
Subjt:  LHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESN---TRIMREY

Query:  LTET
        LT T
Subjt:  LTET

Q94AU9 Chaperonin-like RBCX protein 1, chloroplastic1.7e-5374.45Show/hide
Query:  RASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCK
        R  K  R+  +KMYVPGFGEASPE+KAA++LH+FFTYVAVRIV+AQLESYNPEAY+EL EFLD +S++DGDKF A+LMR SSRH +LALRILEVRSAYCK
Subjt:  RASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCK

Query:  NDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTE
        NDFEWDN+KRLAFK V +SNTR+MREY+ ETS  +T+
Subjt:  NDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTE

Arabidopsis top hitse value%identityAlignment
AT4G04330.1 Chaperonin-like RbcX protein1.2e-5474.45Show/hide
Query:  RASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCK
        R  K  R+  +KMYVPGFGEASPE+KAA++LH+FFTYVAVRIV+AQLESYNPEAY+EL EFLD +S++DGDKF A+LMR SSRH +LALRILEVRSAYCK
Subjt:  RASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVRSAYCK

Query:  NDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTE
        NDFEWDN+KRLAFK V +SNTR+MREY+ ETS  +T+
Subjt:  NDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTE

AT5G19855.1 Chaperonin-like RbcX protein3.1e-0534.55Show/hide
Query:  RNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVR-SAYCKNDFEWDNLKRLAFKMVGESNTRIMREY
        + + N+FTY AVR V  QL   NP  Y      +  +   DG +FL +L +ES   + LA R++  R   Y K   + D+ K   ++ + + N  +MRE 
Subjt:  RNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLASLMRESSRHKSLALRILEVR-SAYCKNDFEWDNLKRLAFKMVGESNTRIMREY

Query:  LTETS--PSD
        L ET   PSD
Subjt:  LTETS--PSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCATCAGCAAGGATTCTTTCTCCTACTCAGTTCCCTTCTATTTTCTCACTACCAAATTTAAACAGAGGCAATGTTTTTCCTGTTAGGCCAATAAAGCCAAGAGC
TTCCAAGTCTATGCGCTTGCATTGCAGTAAGATGTATGTCCCCGGGTTTGGAGAGGCCTCACCAGAATCAAAGGCAGCCAGAAATTTGCACAATTTCTTCACGTATGTTG
CTGTTAGGATAGTGACTGCGCAGCTTGAGAGCTATAATCCAGAAGCGTACCTGGAGTTGATGGAGTTTCTCGATAGACATTCACTGAATGATGGGGACAAATTTCTGGCC
AGTTTGATGCGGGAATCGTCGAGGCATAAATCTCTTGCATTGCGCATACTAGAGGTTCGATCTGCATATTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGC
TTTCAAAATGGTTGGCGAATCCAACACAAGAATAATGAGGGAGTACTTGACAGAGACAAGTCCATCAGACACCGAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAATCATCAGCAAGGATTCTTTCTCCTACTCAGTTCCCTTCTATTTTCTCACTACCAAATTTAAACAGAGGCAATGTTTTTCCTGTTAGGCCAATAAAGCCAAGAGC
TTCCAAGTCTATGCGCTTGCATTGCAGTAAGATGTATGTCCCCGGGTTTGGAGAGGCCTCACCAGAATCAAAGGCAGCCAGAAATTTGCACAATTTCTTCACGTATGTTG
CTGTTAGGATAGTGACTGCGCAGCTTGAGAGCTATAATCCAGAAGCGTACCTGGAGTTGATGGAGTTTCTCGATAGACATTCACTGAATGATGGGGACAAATTTCTGGCC
AGTTTGATGCGGGAATCGTCGAGGCATAAATCTCTTGCATTGCGCATACTAGAGGTTCGATCTGCATATTGCAAAAACGATTTTGAGTGGGACAACCTCAAGCGATTAGC
TTTCAAAATGGTTGGCGAATCCAACACAAGAATAATGAGGGAGTACTTGACAGAGACAAGTCCATCAGACACCGAGAAGTGA
Protein sequenceShow/hide protein sequence
MESSARILSPTQFPSIFSLPNLNRGNVFPVRPIKPRASKSMRLHCSKMYVPGFGEASPESKAARNLHNFFTYVAVRIVTAQLESYNPEAYLELMEFLDRHSLNDGDKFLA
SLMRESSRHKSLALRILEVRSAYCKNDFEWDNLKRLAFKMVGESNTRIMREYLTETSPSDTEK