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IVF0012129 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012129
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr12:2757989..2758246
RNA-Seq ExpressionIVF0012129
SyntenyIVF0012129
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040565.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.05e-2564.77Show/hide
Query:  VLGRRSGFSNCFGWGPKPY--KMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP
        VLGRR G+S   GWG KP   K  S SSS   C Q TVEL+LQAK DQ MQ+I+E TRN+DALV KV+RMRKLIEDM + QQG P+DP
Subjt:  VLGRRSGFSNCFGWGPKPY--KMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP

KAA0049637.1 uncharacterized protein E6C27_scaffold163G001020 [Cucumis melo var. makuwa]4.98e-2465.82Show/hide
Query:  LGRRSGFSNCFGWGPKP--YKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQA
        LGR+SG+S   GWGPKP  YKM +ASSS    PQ T++L+LQAK DQ MQ+I+E TRN+D LV KV+RMRKLIEDM QA
Subjt:  LGRRSGFSNCFGWGPKP--YKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQA

KAA0062293.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]7.76e-2262.22Show/hide
Query:  MVLGRRSGFSNCFGWGPKPY--KMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLI-EDMIQAQQGLPNDP
        +VLGRRSG+S   GWGPKP   K   ASSS+  C Q TVEL+LQAK DQ +Q I+E TRN+ ALV +V++MRKLI EDM QA QG P+DP
Subjt:  MVLGRRSGFSNCFGWGPKPY--KMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLI-EDMIQAQQGLPNDP

KAA0066177.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.35e-2153.93Show/hide
Query:  MVLGRRSGFSNCFGWGPKP--YKMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP
        M+LGRRSG+S C  WGPKP  Y+  +ASS+   C Q  VEL+L    ++ M +I+E TRNYDAL  KV+R+RKLIED+ + QQG P++P
Subjt:  MVLGRRSGFSNCFGWGPKP--YKMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP

TYK23854.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]9.23e-2260.23Show/hide
Query:  VLGRRSGFSNCFGWGPK--PYKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP
        VLGR+  +S   GWGPK    K  S SSS    PQ TVEL+LQAK DQ MQRI+EHTRN+  LV +V++MRKLI+DM +AQQG P+DP
Subjt:  VLGRRSGFSNCFGWGPK--PYKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP

TrEMBL top hitse value%identityAlignment
A0A5A7U5K9 Uncharacterized protein3.0e-1765.82Show/hide
Query:  LGRRSGFSNCFGWGPKP--YKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQA
        LGR+SG+S   GWGPKP  YKM +ASSS    PQ T++L+LQAK DQ MQ+I+E TRN+D LV KV+RMRKLIEDM QA
Subjt:  LGRRSGFSNCFGWGPKP--YKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQA

A0A5A7V2I6 CACTA en-spm transposon protein1.3e-1762.22Show/hide
Query:  MVLGRRSGFSNCFGWGPKP--YKMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLI-EDMIQAQQGLPNDP
        +VLGRRSG+S   GWGPKP   K   ASSS+  C Q TVEL+LQAK DQ +Q I+E TRN+ ALV +V++MRKLI EDM QA QG P+DP
Subjt:  MVLGRRSGFSNCFGWGPKP--YKMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLI-EDMIQAQQGLPNDP

A0A5D3C320 CACTA en-spm transposon protein4.1e-1964.77Show/hide
Query:  VLGRRSGFSNCFGWG--PKPYKMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP
        VLGRR G+S   GWG  PK  K  S SSS   C Q TVEL+LQAK DQ MQ+I+E TRN+DALV KV+RMRKLIEDM + QQG P+DP
Subjt:  VLGRRSGFSNCFGWG--PKPYKMNSASSSI--CPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP

A0A5D3CBL3 Gag/pol protein1.1e-1665.38Show/hide
Query:  GRRSGFSNCFGWGPKP--YKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQA
        GR+SG+S   GWGPKP  YKM +ASSS    PQ T++L+LQAK DQ MQ+I+E TRN+D LV KV+RMRKLIEDM QA
Subjt:  GRRSGFSNCFGWGPKP--YKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQA

A0A5D3DJN9 CACTA en-spm transposon protein8.7e-1760.23Show/hide
Query:  VLGRRSGFSNCFGWGP--KPYKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP
        VLGR+  +S   GWGP  K  K  S SSS    PQ TVEL+LQAK DQ MQRI+EHTRN+  LV +V++MRKLI+DM +AQQG P+DP
Subjt:  VLGRRSGFSNCFGWGP--KPYKMNSASSSIC--PQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTGGGTAGACGATCAGGCTTCTCAAACTGCTTTGGGTGGGGACCCAAGCCCTACAAGATGAATAGTGCGAGCAGTTCCATATGTCCACAGTTCACAGTAGAGCT
CAAATTACAGGCTAAGTTTGATCAAACTATGCAACGGATTAAAGAACATACAAGAAATTACGATGCGTTAGTTTTAAAAGTTCAACGAATGCGGAAGCTCATAGAAGACA
TGATTCAGGCACAACAAGGACTACCGAATGATCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTATTGGGTAGACGATCAGGCTTCTCAAACTGCTTTGGGTGGGGACCCAAGCCCTACAAGATGAATAGTGCGAGCAGTTCCATATGTCCACAGTTCACAGTAGAGCT
CAAATTACAGGCTAAGTTTGATCAAACTATGCAACGGATTAAAGAACATACAAGAAATTACGATGCGTTAGTTTTAAAAGTTCAACGAATGCGGAAGCTCATAGAAGACA
TGATTCAGGCACAACAAGGACTACCGAATGATCCTTAG
Protein sequenceShow/hide protein sequence
MVLGRRSGFSNCFGWGPKPYKMNSASSSICPQFTVELKLQAKFDQTMQRIKEHTRNYDALVLKVQRMRKLIEDMIQAQQGLPNDP