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IVF0012151 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012151
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDouble-stranded RNA-binding protein 2-like
Genome locationchr12:2576098..2577055
RNA-Seq ExpressionIVF0012151
SyntenyIVF0012151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653233.1 hypothetical protein Csa_019953 [Cucumis sativus]1.59e-7890.23Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR++PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
         AMVKAAA+Q SSGAL+ +FRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
XP_008457578.1 PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo]4.86e-89100Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRSRA
        FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRSRA
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRSRA
XP_011648508.1 uncharacterized protein LOC105434501 [Cucumis sativus]1.18e-7890.23Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR++PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
         AMVKAAA+Q SSGAL+ +FRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
XP_022970388.1 uncharacterized protein LOC111469389 [Cucurbita maxima]3.32e-5973.88Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISEC+++ACI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTFSREDT V E+T Q C GK++RRR RPA IRG  RRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRS
        FA+V+AAA +ASSGAL+ MFRRLLCCVAKVDGR 
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRS
XP_023519361.1 uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo]4.50e-5772.39Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISEC+++ CI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTFSREDT V E+T Q C GK++RRR RPA IRG  RRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRS
        FA+V+AAA +ASSGAL+ MFRRLL CVAKVDGR 
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRS
TrEMBL top hitse value%identityAlignment
A0A0A0LXY3 Uncharacterized protein2.3e-5990.23Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISECVDNACIVSAA+PTYVNLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSRED VVPETTTQNCFGKIRRRR++PA IRG RRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
         AMVKAAA+Q SSGAL+ +FRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
A0A1S3C748 uncharacterized protein LOC1034972452.9e-67100Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRSRA
        FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRSRA
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRSRA
A0A5A7SXG3 Uncharacterized protein2.9e-67100Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRSRA
        FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRSRA
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGRSRA
A0A6J1HP59 uncharacterized protein LOC1114647451.1e-4272.93Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISEC+++ACI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTF REDTVV E+T Q C GK++ RR RPA IRG  RRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGAL+ MFRRLL CVAKVDGR
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
A0A6J1I3Q2 uncharacterized protein LOC1114693891.6e-4474.44Show/hide
Query:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC
        MASVCISEC+++ACI+ A +PTY +LQRW EEE  S E RRPR RAA+GISRRQMYLRSYTFSREDT V E+T Q C GK++RRR RPA IRG  RRSRC
Subjt:  MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRC

Query:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGAL+ MFRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALVLMFRRLLCCVAKVDGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46310.1 unknown protein4.6e-0439.73Show/hide
Query:  MASVCISECVD--NACIVSAAQPTYVNLQRWSEEE-----KWSTERRRPRPRAAEGISRRQMYLRSYTFSRED
        MAS CI +CV+  N  I      T+  + +W   E       S +    R  A E +S RQMYLRSYTFSR++
Subjt:  MASVCISECVD--NACIVSAAQPTYVNLQRWSEEE-----KWSTERRRPRPRAAEGISRRQMYLRSYTFSRED
AT5G02640.1 unknown protein9.5e-1034.16Show/hide
Query:  MASVCISECVDNA----CIVSAAQPTYVNLQRWSEEE-KWSTERRR----PRPRAAEGISRRQMYLRSYTFSRED-----TVVPETTTQNCFGKIR----
        M SVCIS C+++A      V   + +YVNL +W E + ++    RR    P  R  + IS RQMYLRSYTFSRED       V   T  +C G+++    
Subjt:  MASVCISECVDNA----CIVSAAQPTYVNLQRWSEEE-KWSTERRR----PRPRAAEGISRRQMYLRSYTFSRED-----TVVPETTTQNCFGKIR----

Query:  -RRRQR-----------PARIRGSRRRSRCFAMVKAAATQASSGALVLMFRRLLCCVAKVD
         RR+ +             R RG +RR     + +    + +   ++ +FRRLL C A VD
Subjt:  -RRRQR-----------PARIRGSRRRSRCFAMVKAAATQASSGALVLMFRRLLCCVAKVD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTTTCTGCTGCGCAGCCCACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAGAAGTGGTCTAC
AGAGCGCCGCCGTCCAAGGCCGAGAGCGGCGGAGGGAATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACACCGTTGTCCCTGAGACTACAA
CTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCAGAGGCCAGCGAGGATTCGCGGCAGCCGTAGGAGGAGCCGATGTTTCGCCATGGTGAAAGCCGCCGCCACTCAG
GCTTCTTCCGGCGCCTTGGTCTTAATGTTCCGACGGTTGCTTTGTTGCGTGGCGAAAGTTGACGGTCGCTCACGAGCGTAA
mRNA sequenceShow/hide mRNA sequence
TTAGTTGTTATTTCTTAACAATTAAACTAATCTCTCTCTCTTGCAATTTATTTTTTTGGCATTAATCATCTTTCTTAGTTGTAATCTCAATTACACAACAAAAACCCATT
TCCCCATTCTCTAAGATCTCTAGAATTCCATCGTTCTCGCCGGAATTTTTTCGCCGGCGATACGTACGATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGC
ATCGTTTCTGCTGCGCAGCCCACGTACGTCAACCTGCAGCGGTGGTCGGAGGAGGAGAAGTGGTCTACAGAGCGCCGCCGTCCAAGGCCGAGAGCGGCGGAGGGAATCTC
TCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCTAGAGAGGACACCGTTGTCCCTGAGACTACAACTCAGAATTGCTTTGGGAAGATCAGGCGGCGGCGCCAGAGGC
CAGCGAGGATTCGCGGCAGCCGTAGGAGGAGCCGATGTTTCGCCATGGTGAAAGCCGCCGCCACTCAGGCTTCTTCCGGCGCCTTGGTCTTAATGTTCCGACGGTTGCTT
TGTTGCGTGGCGAAAGTTGACGGTCGCTCACGAGCGTAAGTGTTTGTGAATTTTGTGAAATCAAAGGTTTCTTTTTTCTCTTCTTTTCCTTTTCTTTTCGTTTTTAATGA
AATAGCCAACTATGAAATAAAGGTAAGGAAACATAGAAATCCTCTCCCTCGAGCCTCGAGGGGCACCATCACCATCTTAGTTGGGATGACAATGGGTCATTTTGACTTTG
GCTCCTACATATACATTCGACGAGTCATTCCATGGAGTGTCAATTGATTTACATTCAACCTCCTCAATAACCACATACATACACAAATCTAAATATTGTGAGCTTACATC
TCCACCTCCCAAATTTCATTTCCTTCCTATTGTGTAAAAATCGATATATAATTATAAATAAACATTGTTAATTATCTG
Protein sequenceShow/hide protein sequence
MASVCISECVDNACIVSAAQPTYVNLQRWSEEEKWSTERRRPRPRAAEGISRRQMYLRSYTFSREDTVVPETTTQNCFGKIRRRRQRPARIRGSRRRSRCFAMVKAAATQ
ASSGALVLMFRRLLCCVAKVDGRSRA