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IVF0012193 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012193
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description50S ribosomal protein L27-like
Genome locationchr05:23446210..23446871
RNA-Seq ExpressionIVF0012193
SyntenyIVF0012193
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001684 - Ribosomal protein L27
IPR018261 - Ribosomal protein L27, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139171.1 uncharacterized protein LOC101207653 [Cucumis sativus]2.94e-9895.27Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
        FALKEGNVKFEK+KLSGRKWVHVIPK+GHVLHPVY TTSTS QLKT A
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA

XP_016901663.1 PREDICTED: 50S ribosomal protein L27-like [Cucumis melo]5.72e-105100Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
        FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA

XP_022964702.1 uncharacterized protein LOC111464705 [Cucurbita moschata]4.01e-9692.47Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVTNVPVYSSF DG+  GL+LLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKT
        FALKEG VKFEKHKLSGRKWVH+IPK+GHVLHPVYATT  SP+LKT
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKT

XP_022970580.1 uncharacterized protein LOC111469515 [Cucurbita maxima]1.70e-9792.57Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDG+  GL+LLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
        FALKEG VKFEKHKLSGRKWVH+IPK+GHVLHPVYATT  SP+LKT A
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA

XP_038877023.1 50S ribosomal protein L27-like [Benincasa hispida]9.85e-9792.52Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVT VPVYSSFSDGA  GL+LLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERV PGNIIVRQRGTRFHPGDYVG+GKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTT
        FALKEG V FEKHKLSGRKWVHVIPK+GHVLHP+YATTSTSP+LKTT
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTT

TrEMBL top hitse value%identityAlignment
A0A0A0LIQ3 Uncharacterized protein1.2e-7495.27Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDS PK LGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
        FALKEGNVKFEK+KLSGRKWVHVIPK+GHVLHPVY TTSTS QLKT A
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA

A0A1S4E0A6 50S ribosomal protein L27-like9.6e-80100Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
        FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA

A0A5A7TXR2 50S ribosomal protein L27-like9.6e-80100Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
        FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA

A0A6J1HP14 uncharacterized protein LOC1114647055.1e-7392.47Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVTNVPVYSSF DG+  GL+LLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKT
        FALKEG VKFEKHKLSGRKWVH+IPK+GHVLHPVYATT  SP+LKT
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKT

A0A6J1I390 uncharacterized protein LOC1114695154.6e-7492.57Show/hide
Query:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
        MLNIATTFCKRLNVKDLVTNVPVYSSFSDG+  GL+LLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL
Subjt:  MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTL

Query:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA
        FALKEG VKFEKHKLSGRKWVH+IPK+GHVLHPVYATT  SP+LKT A
Subjt:  FALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA

SwissProt top hitse value%identityAlignment
A6UDV3 50S ribosomal protein L276.5e-2567.86Show/hide
Query:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPK
        A KK  GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGT++HPG  VG+GKDHT+FAL  GNV F K K +GR +V V+PK
Subjt:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPK

A9IM57 50S ribosomal protein L277.7e-2671.08Show/hide
Query:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIP
        A KK  GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGTR+HPGD VGIGKDHTLFAL EG V F++ K   R +V VIP
Subjt:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIP

B4RZH4 50S ribosomal protein L276.5e-2567.07Show/hide
Query:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVI
        A KK  GSTKNGRDS+ K LGVK+FGGE V+ GNIIVRQRGTRFH GD +GIGKDHTLFALK+G V+F+      RK+V ++
Subjt:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVI

Q6G507 50S ribosomal protein L272.9e-2569.88Show/hide
Query:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIP
        A KK  GS++NGRDS+ K LGVKKFGGE VI GNIIVRQRGTR+HPGD VGIGKDHTLFAL +G V F++ K + R +V VIP
Subjt:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIP

Q92LB7 50S ribosomal protein L278.5e-2567.86Show/hide
Query:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPK
        A KK  GS++NGRDS+ K LGVKKFGGE VIPGNIIVRQRGT++H G  VG+GKDHT+FAL  GNV F K K +GR +V V+PK
Subjt:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPK

Arabidopsis top hitse value%identityAlignment
AT2G16930.1 Ribosomal protein L27 family protein5.1e-5768.87Show/hide
Query:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT
        LN A + C+R+++++L+T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDS PK LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHT
Subjt:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT

Query:  LFALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVY--ATTSTSPQLKTTA
        LFALKEG V+FEK K++GRKW+HV P  GHVLHP+Y  A  + S +L T +
Subjt:  LFALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVY--ATTSTSPQLKTTA

AT2G16930.2 Ribosomal protein L27 family protein5.1e-5768.87Show/hide
Query:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT
        LN A + C+R+++++L+T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDS PK LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHT
Subjt:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT

Query:  LFALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVY--ATTSTSPQLKTTA
        LFALKEG V+FEK K++GRKW+HV P  GHVLHP+Y  A  + S +L T +
Subjt:  LFALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVY--ATTSTSPQLKTTA

AT2G16930.3 Ribosomal protein L27 family protein5.1e-5768.87Show/hide
Query:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT
        LN A + C+R+++++L+T VP Y  SS SDG+++GL+L+ +RWATKKTAGSTKNGRDS PK LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHT
Subjt:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT

Query:  LFALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVY--ATTSTSPQLKTTA
        LFALKEG V+FEK K++GRKW+HV P  GHVLHP+Y  A  + S +L T +
Subjt:  LFALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVY--ATTSTSPQLKTTA

AT5G15220.1 Ribosomal protein L27 family protein1.6e-5870.2Show/hide
Query:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT
        LN A + C+R+++++L+T VP Y  SS SDG+++GL+L+F+RWATKKTAGSTKNGRDS PK LGVKKFGGE VIPGNIIVRQRGTRFHPGDYVGIGKDHT
Subjt:  LNIATTFCKRLNVKDLVTNVPVY--SSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHT

Query:  LFALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVY--ATTSTSPQLKTTA
        LFALKEG V+FEK K++GRKW+HV P  GHVLHP+Y  A  + S +LKT +
Subjt:  LFALKEGNVKFEKHKLSGRKWVHVIPKDGHVLHPVY--ATTSTSPQLKTTA

AT5G40950.1 ribosomal protein large subunit 273.8e-2060Show/hide
Query:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPKD
        A KK AGSTKNGRDS  + LGVK +G +   PG IIVRQRGT+FH G  VGIGKDHT+F+L +G VKFEK     RK + V P++
Subjt:  ATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKFEKHKLSGRKWVHVIPKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAATATTGCGACCACATTTTGCAAGCGACTGAATGTCAAGGATTTGGTGACCAATGTTCCTGTATATAGCAGTTTTAGTGATGGAGCTACTGCTGGATTAAACTT
ATTATTCAGACGTTGGGCTACCAAAAAGACAGCTGGATCGACTAAAAATGGACGAGACTCAAAACCCAAGAATCTTGGTGTAAAGAAATTTGGTGGGGAGAGAGTTATTC
CCGGTAACATTATTGTTCGTCAACGGGGCACTCGGTTTCATCCTGGAGATTATGTGGGAATAGGGAAGGATCACACTCTTTTTGCCCTTAAAGAAGGCAATGTCAAGTTC
GAAAAGCACAAGCTGAGCGGACGTAAGTGGGTGCACGTTATACCAAAGGATGGGCACGTTCTGCATCCTGTTTATGCAACTACTTCTACTTCTCCACAATTGAAGACAAC
AGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAATATTGCGACCACATTTTGCAAGCGACTGAATGTCAAGGATTTGGTGACCAATGTTCCTGTATATAGCAGTTTTAGTGATGGAGCTACTGCTGGATTAAACTT
ATTATTCAGACGTTGGGCTACCAAAAAGACAGCTGGATCGACTAAAAATGGACGAGACTCAAAACCCAAGAATCTTGGTGTAAAGAAATTTGGTGGGGAGAGAGTTATTC
CCGGTAACATTATTGTTCGTCAACGGGGCACTCGGTTTCATCCTGGAGATTATGTGGGAATAGGGAAGGATCACACTCTTTTTGCCCTTAAAGAAGGCAATGTCAAGTTC
GAAAAGCACAAGCTGAGCGGACGTAAGTGGGTGCACGTTATACCAAAGGATGGGCACGTTCTGCATCCTGTTTATGCAACTACTTCTACTTCTCCACAATTGAAGACAAC
AGCATAA
Protein sequenceShow/hide protein sequence
MLNIATTFCKRLNVKDLVTNVPVYSSFSDGATAGLNLLFRRWATKKTAGSTKNGRDSKPKNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGIGKDHTLFALKEGNVKF
EKHKLSGRKWVHVIPKDGHVLHPVYATTSTSPQLKTTA