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IVF0012203 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012203
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr01:8076982..8077176
RNA-Seq ExpressionIVF0012203
SyntenyIVF0012203
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056276.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.51e-0968.18Show/hide
Query:  IGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIF
        + RGIPD VLV  +ECLSRL   D+ PDA K VGISFPDVFF F
Subjt:  IGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIF

TYK01082.1 zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa]5.81e-0851.85Show/hide
Query:  IGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRREYP
        +GRGIP+ +LV     +S+    D+C DAVK VG  +PDVF  F DVF+RRE P
Subjt:  IGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRREYP

TYK14413.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]6.53e-1863.49Show/hide
Query:  ADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRREYPRLL
        AD    +G+G PD  LVRRRE LSR    D+ PD V +VGISFPDV  IF DVF+RREYPRLL
Subjt:  ADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRREYPRLL

TYK21553.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.74e-0770.59Show/hide
Query:  DICPDAVKYVGISFPDVFFIFVDVFMRREYPRLL
        D+ PDA+ YVG  +PDV FIF DVF RREYPRLL
Subjt:  DICPDAVKYVGISFPDVFFIFVDVFMRREYPRLL

TYK22927.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]3.25e-0954.72Show/hide
Query:  SIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRRE
        ++ R IP+ VLV RRE +SR   SD+CPDAV  VG  +PDVF    D+ MRRE
Subjt:  SIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRRE

TrEMBL top hitse value%identityAlignment
A0A5A7UPN4 CACTA en-spm transposon protein6.1e-0768.18Show/hide
Query:  IGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIF
        + RGIPD VLV  +ECLSRL   D+ PDA K VGISFPDVFF F
Subjt:  IGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIF

A0A5A7UWQ1 CACTA en-spm transposon protein3.4e-0557.78Show/hide
Query:  MADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFP
        + D CH +G+GIPD VLVRRRECLS+L   D   D VK V  S P
Subjt:  MADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFP

A0A5D3CRC0 CACTA en-spm transposon protein5.7e-1363.49Show/hide
Query:  ADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRREYPRLL
        AD    +G+G PD  LVRRRE LSR    D+ PD V +VGISFPDV  IF DVF+RREYPRLL
Subjt:  ADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRREYPRLL

A0A5D3DGV6 NBS-LRR type resistance protein4.0e-0654.72Show/hide
Query:  SIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRRE
        ++ R IP+ VLV RRE +SR   SD+CPDAV  VG  +PDVF    D+ MRRE
Subjt:  SIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRRE

A0A5D3E1C4 CACTA en-spm transposon protein3.4e-0557.78Show/hide
Query:  MADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFP
        + D CH +G+GIPD VLVRRRECLS+L   D   D VK V  S P
Subjt:  MADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGACACATGTCACAGCATCGGGAGAGGCATTCCTGACACCGTGTTGGTACGGCGTCGGGAATGCCTCTCCCGACTCGGTTTTTCTGACATTTGTCCTGATGCCGT
GAAATACGTCGGCATATCATTTCCCGACGTATTTTTCATTTTCGTCGACGTTTTTATGCGTCGAGAGTACCCCCGTCTCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGACACATGTCACAGCATCGGGAGAGGCATTCCTGACACCGTGTTGGTACGGCGTCGGGAATGCCTCTCCCGACTCGGTTTTTCTGACATTTGTCCTGATGCCGT
GAAATACGTCGGCATATCATTTCCCGACGTATTTTTCATTTTCGTCGACGTTTTTATGCGTCGAGAGTACCCCCGTCTCTTATAG
Protein sequenceShow/hide protein sequence
MADTCHSIGRGIPDTVLVRRRECLSRLGFSDICPDAVKYVGISFPDVFFIFVDVFMRREYPRLL