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IVF0012237 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012237
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionUnknown protein
Genome locationchr03:14248386..14248565
RNA-Seq ExpressionIVF0012237
SyntenyIVF0012237
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045388.1 putative reverse transcriptase [Cucumis melo var. makuwa]8.52e-30100Show/hide
Query:  MVGDTALVKKPALARMKRIHEEVAQMGNEVDGGDDLNRVRPTQNWLAHQTDRGPLD
        MVGDTALVKKPALARMKRIHEEVAQMGNEVDGGDDLNRVRPTQNWLAHQTDRGPLD
Subjt:  MVGDTALVKKPALARMKRIHEEVAQMGNEVDGGDDLNRVRPTQNWLAHQTDRGPLD
TrEMBL top hitse value%identityAlignment
A0A5D3D4N0 Putative reverse transcriptase5.1e-24100Show/hide
Query:  MVGDTALVKKPALARMKRIHEEVAQMGNEVDGGDDLNRVRPTQNWLAHQTDRGPLD
        MVGDTALVKKPALARMKRIHEEVAQMGNEVDGGDDLNRVRPTQNWLAHQTDRGPLD
Subjt:  MVGDTALVKKPALARMKRIHEEVAQMGNEVDGGDDLNRVRPTQNWLAHQTDRGPLD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGAGATACTGCCTTGGTGAAGAAACCGGCATTGGCCAGAATGAAAAGAATCCACGAGGAGGTGGCGCAAATGGGAAACGAAGTTGATGGAGGGGATGACCTAAA
TCGGGTCCGTCCCACTCAGAATTGGTTGGCTCATCAAACAGATCGTGGACCACTTGATGTTGGTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGAGATACTGCCTTGGTGAAGAAACCGGCATTGGCCAGAATGAAAAGAATCCACGAGGAGGTGGCGCAAATGGGAAACGAAGTTGATGGAGGGGATGACCTAAA
TCGGGTCCGTCCCACTCAGAATTGGTTGGCTCATCAAACAGATCGTGGACCACTTGATGTTGGTGCATAG
Protein sequenceShow/hide protein sequence
MVGDTALVKKPALARMKRIHEEVAQMGNEVDGGDDLNRVRPTQNWLAHQTDRGPLDVGA