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IVF0012247 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012247
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionHistone deacetylase-like protein
Genome locationchr04:2971772..2972554
RNA-Seq ExpressionIVF0012247
SyntenyIVF0012247
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038795.1 uncharacterized protein E6C27_scaffold92G003500 [Cucumis melo var. makuwa]2.28e-10498.09Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC
        MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSD+IRKC
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC

Query:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL
        APWRAKSLEIIVPENLPRPSQRRK EAIAYEF DMKKNAPGVQVISSEISSDYCFSL
Subjt:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL

XP_004136339.1 uncharacterized protein LOC101204764 [Cucumis sativus]1.32e-7782.21Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSR-SVCALGLASLIFAIEIGDVFIASESLALESSPQ-LVDYYSR-RRMKKIPRWSDKI
        MAL INCSSSS+ LLPQ PH NSF STK++KL LKED  SWRSR SVCALGLASLIFAIEI DVFIASESLA+ES PQ LVDYYSR RRMKKI RWSDKI
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSR-SVCALGLASLIFAIEIGDVFIASESLALESSPQ-LVDYYSR-RRMKKIPRWSDKI

Query:  RKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAY-EFTDMKKNAP-GVQVISSEISSD-YCFSL
        RKCAPWRA SLEIIVPENLPR SQRRKWE IAY EF D+KKNAP G+QV +SEISSD YCFSL
Subjt:  RKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAY-EFTDMKKNAP-GVQVISSEISSD-YCFSL

XP_022138217.1 uncharacterized protein LOC111009442 isoform X1 [Momordica charantia]6.16e-5767.3Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSP--QLVDYYSRRRMKKIPRWSDKIR
        MAL +NCS+S VFLLP+ P  NSFD++K A+L LKE  GSWRSR  CALGLASLI AIE G+ F+A E  ALES P  QLVD    RRMK I RWSDK R
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSP--QLVDYYSRRRMKKIPRWSDKIR

Query:  KCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL
        KCAPWRA SLE IVPENLPRPSQRRKWE + +   D++ NAP +QVISSE +S YCFSL
Subjt:  KCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL

XP_023524416.1 uncharacterized protein LOC111788320 [Cucurbita pepo subsp. pepo]8.63e-5970.7Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC
        M L INCSSS V LLP+ P  NSFDS+K A+L  K+D G+WR RS CALGLASLI AIE GDV +A E+ ALES PQ+VD  SRR   KI RWSDK RKC
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC

Query:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL
        A WRA SLEIIVPENLPRPSQRRKWEAIA  FTD++ NAP VQVISS+  S YCFSL
Subjt:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL

XP_038899075.1 uncharacterized protein LOC120086473 [Benincasa hispida]3.15e-7678.98Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC
        MAL I+CSSSSVFLLPQ P  NSFDSTKTA+L +KED GSWRSRSVC LGLASLIFAIE+ D+F+ASESLALES PQLVDY SR+R+K I RWSDK RKC
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC

Query:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL
        APWRA SLE IVPENLPRPS RRKWEAIAYE  D+K NAPG++VISS+ SS+YCFSL
Subjt:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL

TrEMBL top hitse value%identityAlignment
A0A0A0LDQ8 Uncharacterized protein1.2e-5982.21Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRS-RSVCALGLASLIFAIEIGDVFIASESLALESSPQ-LVDYYSR-RRMKKIPRWSDKI
        MAL INCSSSS+ LLPQ PH NSF STK++KL LKED  SWRS RSVCALGLASLIFAIEI DVFIASESLA+ES PQ LVDYYSR RRMKKI RWSDKI
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRS-RSVCALGLASLIFAIEIGDVFIASESLALESSPQ-LVDYYSR-RRMKKIPRWSDKI

Query:  RKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAY-EFTDMKKNA-PGVQVISSEISSD-YCFSL
        RKCAPWRA SLEIIVPENLPR SQRRKWE IAY EF D+KKNA PG+QV +SEISSD YCFSL
Subjt:  RKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAY-EFTDMKKNA-PGVQVISSEISSD-YCFSL

A0A5A7TBN7 Uncharacterized protein6.0e-8098.09Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC
        MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSD+IRKC
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC

Query:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL
        APWRAKSLEIIVPENLPRPSQRRK EAIAYEF DMKKNAPGVQVISSEISSDYCFSL
Subjt:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL

A0A6J1CAG3 uncharacterized protein LOC111009442 isoform X19.0e-4467.3Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALES--SPQLVDYYSRRRMKKIPRWSDKIR
        MAL +NC S+SVFLLP+ P  NSFD++K A+L LKE  GSWRSR  CALGLASLI AIE G+ F+A E  ALES   PQLVD    RRM KI RWSDK R
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALES--SPQLVDYYSRRRMKKIPRWSDKIR

Query:  KCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL
        KCAPWRA SLE IVPENLPRPSQRRKWE + +   D++ NAP +QVISSE +S YCFSL
Subjt:  KCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL

A0A6J1CAH3 uncharacterized protein LOC111009442 isoform X21.6e-3766.21Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALES--SPQLVDYYSRRRMKKIPRWSDKIR
        MAL +NC S+SVFLLP+ P  NSFD++K A+L LKE  GSWRSR  CALGLASLI AIE G+ F+A E  ALES   PQLVD    RRM KI RWSDK R
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALES--SPQLVDYYSRRRMKKIPRWSDKIR

Query:  KCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQ
        KCAPWRA SLE IVPENLPRPSQRRKWE + +   D++ NAP +Q
Subjt:  KCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQ

A0A6J1J2V8 uncharacterized protein LOC1114807831.1e-3867.83Show/hide
Query:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC
        M L INC SSSV LLP+ P  NSFDS+K A+L  K+D G+WR RS CALGLASLI AIE GD+ +A E+ ALES PQ+VD     R  KI RWSDK RKC
Subjt:  MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKC

Query:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQ
        A WRA SLEIIVPENLPRPSQRRKWE IA  FTD+ +NAP VQ
Subjt:  APWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25625.1 unknown protein1.9e-0940.71Show/hide
Query:  LGLAS--LIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIP--RWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQV
        LG+A+  +I  I+I DV  AS   A+  SP             +P  RWSDK R C PW   SLE IVPENLPRPS  R+ E         K +AP V V
Subjt:  LGLAS--LIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIP--RWSDKIRKCAPWRAKSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQV

Query:  ISSEISSDYCFSL
        + + ++   CFS+
Subjt:  ISSEISSDYCFSL

AT2G25625.2 unknown protein2.9e-1036.18Show/hide
Query:  PHLNSFDSTKTAKLPLKEDGGSWRS-------RSVCA--LGLAS--LIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIP--RWSDKIRKCAPWRA
        P L+S  +   A L       SWR+       ++ C+  LG+A+  +I  I+I DV  AS   A+  SP             +P  RWSDK R C PW  
Subjt:  PHLNSFDSTKTAKLPLKEDGGSWRS-------RSVCA--LGLAS--LIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIP--RWSDKIRKCAPWRA

Query:  KSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL
         SLE IVPENLPRPS  R+ E         K +AP V V+ + ++   CFS+
Subjt:  KSLEIIVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTAACAATCAACTGTTCATCTTCTTCAGTTTTTCTCCTTCCTCAACCTCCCCATCTGAATTCCTTCGATTCTACAAAAACCGCTAAATTACCTCTGAAAGAAGA
TGGAGGATCATGGAGAAGTCGAAGCGTATGCGCTTTAGGTTTAGCGAGTTTGATTTTCGCAATCGAAATCGGCGACGTCTTCATTGCTAGTGAATCTCTTGCTCTGGAAT
CGTCGCCGCAACTTGTGGATTATTATTCACGGAGGCGTATGAAGAAGATACCGAGATGGAGTGATAAGATTAGAAAATGCGCTCCATGGCGAGCGAAATCGTTGGAGATC
ATCGTGCCGGAGAATCTCCCGAGGCCGTCACAGCGTCGGAAGTGGGAAGCCATTGCATATGAATTCACAGATATGAAGAAGAACGCTCCGGGAGTTCAAGTAATTTCTTC
TGAAATTAGCTCTGATTACTGTTTCTCCTTGTAA
mRNA sequenceShow/hide mRNA sequence
CAAATTAAAACTAGAGGTAATGGCTTTAACAATCAACTGTTCATCTTCTTCAGTTTTTCTCCTTCCTCAACCTCCCCATCTGAATTCCTTCGATTCTACAAAAACCGCTA
AATTACCTCTGAAAGAAGATGGAGGATCATGGAGAAGTCGAAGCGTATGCGCTTTAGGTTTAGCGAGTTTGATTTTCGCAATCGAAATCGGCGACGTCTTCATTGCTAGT
GAATCTCTTGCTCTGGAATCGTCGCCGCAACTTGTGGATTATTATTCACGGAGGCGTATGAAGAAGATACCGAGATGGAGTGATAAGATTAGAAAATGCGCTCCATGGCG
AGCGAAATCGTTGGAGATCATCGTGCCGGAGAATCTCCCGAGGCCGTCACAGCGTCGGAAGTGGGAAGCCATTGCATATGAATTCACAGATATGAAGAAGAACGCTCCGG
GAGTTCAAGTAATTTCTTCTGAAATTAGCTCTGATTACTGTTTCTCCTTGTAAATTTGTATGGCTTTTATTTTGTAAGTCGTTGTATCAATCAATCACATCAATGGCTAC
ATTGTTAATATTGCTTTTGATGTTCATCTTATTTCGTATCAATCAAATCCGATGTTCGTTTATTGATGAACATATCTTAGGATTGGAAAATTGAAGGGGA
Protein sequenceShow/hide protein sequence
MALTINCSSSSVFLLPQPPHLNSFDSTKTAKLPLKEDGGSWRSRSVCALGLASLIFAIEIGDVFIASESLALESSPQLVDYYSRRRMKKIPRWSDKIRKCAPWRAKSLEI
IVPENLPRPSQRRKWEAIAYEFTDMKKNAPGVQVISSEISSDYCFSL