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IVF0012270 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012270
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionCACTA en-spm transposon protein
Genome locationchr08:31177101..31177367
RNA-Seq ExpressionIVF0012270
SyntenyIVF0012270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031879.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]2.13e-3289.04Show/hide
Query:  MGTVQRIGRVRVVEEDDERRRGRHTTRNRGSFDANHDVGRKSVKKMKGSSNAQCKTSGENAIPDAVKYTSETT
        MGTVQRIGRVRVVEEDDERRRGR TTRNRGSFDANHDVGRKSVKKMKGSSNAQCKTSGENAIPDA +    +T
Subjt:  MGTVQRIGRVRVVEEDDERRRGRHTTRNRGSFDANHDVGRKSVKKMKGSSNAQCKTSGENAIPDAVKYTSETT
TrEMBL top hitse value%identityAlignment
A0A5A7SRG5 CACTA en-spm transposon protein1.1e-2589.04Show/hide
Query:  MGTVQRIGRVRVVEEDDERRRGRHTTRNRGSFDANHDVGRKSVKKMKGSSNAQCKTSGENAIPDAVKYTSETT
        MGTVQRIGRVRVVEEDDERRRGR TTRNRGSFDANHDVGRKSVKKMKGSSNAQCKTSGENAIPDA +    +T
Subjt:  MGTVQRIGRVRVVEEDDERRRGRHTTRNRGSFDANHDVGRKSVKKMKGSSNAQCKTSGENAIPDAVKYTSETT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAACAGTCCAGCGAATAGGAAGAGTCCGGGTTGTAGAGGAAGACGATGAGAGGCGAAGAGGAAGACACACTACAAGAAATCGGGGTTCTTTCGATGCAAAT
CACGACGTCGGGAGAAAAAGCGTCAAAAAAATGAAAGGATCTTCCAACGCCCAGTGTAAGACGTCGGGAGAAAATGCTATTCCCGACGCCGTAAAATATACGTCG
GAAACAACGTCGGGCATTATATGTTTTCCCGACACCATGCACCATGCGTCGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAACAGTCCAGCGAATAGGAAGAGTCCGGGTTGTAGAGGAAGACGATGAGAGGCGAAGAGGAAGACACACTACAAGAAATCGGGGTTCTTTCGATGCAAAT
CACGACGTCGGGAGAAAAAGCGTCAAAAAAATGAAAGGATCTTCCAACGCCCAGTGTAAGACGTCGGGAGAAAATGCTATTCCCGACGCCGTAAAATATACGTCG
GAAACAACGTCGGGCATTATATGTTTTCCCGACACCATGCACCATGCGTCGAGATAG
Protein sequenceShow/hide protein sequence
MGTVQRIGRVRVVEEDDERRRGRHTTRNRGSFDANHDVGRKSVKKMKGSSNAQCKTSGENAIPDAVKYTSETTSGIICFPDTMHHASR