; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0012312 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012312
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionprotein indeterminate-domain 16
Genome locationchr02:22854342..22854856
RNA-Seq ExpressionIVF0012312
SyntenyIVF0012312
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039288 - Zinc finger protein SHOOT GRAVITROPISM 5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057771.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]1.56e-9793.57Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP          YEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_004138047.1 protein indeterminate-domain 16 [Cucumis sativus]2.24e-9190.86Show/hide
Query:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSDSS-LRFRSDP-FEAGSGGSVDLQLSISLRPIRP-----------YEEVMKPEAASCVEALKWQAAEQI
        MEDEDQKELQLLPTPHSIASSS SH+SSRPSDSS LRFRSDP FEAGSGGSVDLQLSISLRPIRP           YEEVMKPEAASCV+ALKWQAAEQI
Subjt:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSDSS-LRFRSDP-FEAGSGGSVDLQLSISLRPIRP-----------YEEVMKPEAASCVEALKWQAAEQI

Query:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_008464429.1 PREDICTED: protein indeterminate-domain 16 [Cucumis melo]3.84e-9894.15Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP          YEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_022921773.1 protein indeterminate-domain 16-like [Cucurbita moschata]5.84e-8888.82Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSS--HMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP-------YEEVMKPEAASCVEALKWQAAEQIRLAAM
        MEDEDQKELQLLPTPH+IASSSS  HMSSRPS SS+RFRSDP+EAG G S+DLQLSIS+RPIRP       YEEVMKPEAASCVEALKWQAAEQIRLAAM
Subjt:  MEDEDQKELQLLPTPHSIASSSS--HMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP-------YEEVMKPEAASCVEALKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        EKAYAERVRELTKREIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_038878928.1 protein indeterminate-domain 16 [Benincasa hispida]1.11e-9493.45Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP-------YEEVMKPEAASCVEALKWQAAEQIRLAAMEK
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSD FEA   GSVDLQLSISLRPIRP       YEEVMKPEAASCVEALKWQAAEQIRLAAMEK
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP-------YEEVMKPEAASCVEALKWQAAEQIRLAAMEK

Query:  AYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  AYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

TrEMBL top hitse value%identityAlignment
A0A0A0LRS8 Uncharacterized protein1.2e-7090.86Show/hide
Query:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRP-----------YEEVMKPEAASCVEALKWQAAEQI
        MEDEDQKELQLLPTPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRP           YEEVMKPEAASCV+ALKWQAAEQI
Subjt:  MEDEDQKELQLLPTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRP-----------YEEVMKPEAASCVEALKWQAAEQI

Query:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A1S3CN02 protein indeterminate-domain 169.1e-7694.15Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP          YEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5A7UWD1 Protein indeterminate-domain 162.7e-7593.57Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP          YEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        +EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5D3BFD1 Protein indeterminate-domain 169.1e-7694.15Show/hide
Query:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA
        MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP          YEEVMKPEAASCVEALKWQAAEQIRLAA
Subjt:  MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP----------YEEVMKPEAASCVEALKWQAAEQIRLAA

Query:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  MEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A6J1E4S8 protein indeterminate-domain 16-like4.1e-6888.82Show/hide
Query:  MEDEDQKELQLLPTPHSIA--SSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP-------YEEVMKPEAASCVEALKWQAAEQIRLAAM
        MEDEDQKELQLLPTPH+IA  SSSSHMSSRPS SS+RFRSDP+EAG  GS+DLQLSIS+RPIRP       YEEVMKPEAASCVEALKWQAAEQIRLAAM
Subjt:  MEDEDQKELQLLPTPHSIA--SSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRP-------YEEVMKPEAASCVEALKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        EKAYAERVRELTKREIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

SwissProt top hitse value%identityAlignment
F4IPE3 Zinc finger protein SHOOT GRAVITROPISM 52.1e-0830.07Show/hide
Query:  ELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQI-RLAAMEKAYAERVRELTKRE
        ELQLLP        SS+ +    +   + + +P    +       L++S+ P   Y+     +    +      A+EQI ++A  EKAYAE  +   KR+
Subjt:  ELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQI-RLAAMEKAYAERVRELTKRE

Query:  IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
         E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Q9C9X7 Protein indeterminate-domain 141.5e-0644.44Show/hide
Query:  ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        E  R  TKR+IE+A+ EFA A+++ + AR E+ KA   +E A+R++ +T M+ITC +C+Q F+
Subjt:  ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Q9FRH4 Protein indeterminate-domain 161.0e-0733.33Show/hide
Query:  RPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE
        RPS+      + PF A S     L+L +S+   R   +    E        K +A E+ R        AE  R+  KR+IE+A+ +F +A+++ E A+ E
Subjt:  RPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE

Query:  VEKAERMKERATRQMDSTCMEITCQSCRQRFR
        +EKA  ++E A +++++T MEITC SC+Q F+
Subjt:  VEKAERMKERATRQMDSTCMEITCQSCRQRFR

Arabidopsis top hitse value%identityAlignment
AT1G25250.1 indeterminate(ID)-domain 167.3e-0933.33Show/hide
Query:  RPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE
        RPS+      + PF A S     L+L +S+   R   +    E        K +A E+ R        AE  R+  KR+IE+A+ +F +A+++ E A+ E
Subjt:  RPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREE

Query:  VEKAERMKERATRQMDSTCMEITCQSCRQRFR
        +EKA  ++E A +++++T MEITC SC+Q F+
Subjt:  VEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.1 C2H2-like zinc finger protein1.5e-0930.07Show/hide
Query:  ELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQI-RLAAMEKAYAERVRELTKRE
        ELQLLP        SS+ +    +   + + +P    +       L++S+ P   Y+     +    +      A+EQI ++A  EKAYAE  +   KR+
Subjt:  ELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQI-RLAAMEKAYAERVRELTKRE

Query:  IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
         E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.2 C2H2-like zinc finger protein1.5e-0930.07Show/hide
Query:  ELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQI-RLAAMEKAYAERVRELTKRE
        ELQLLP        SS+ +    +   + + +P    +       L++S+ P   Y+     +    +      A+EQI ++A  EKAYAE  +   KR+
Subjt:  ELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQI-RLAAMEKAYAERVRELTKRE

Query:  IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
         E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.3 C2H2-like zinc finger protein1.5e-0930.07Show/hide
Query:  ELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQI-RLAAMEKAYAERVRELTKRE
        ELQLLP        SS+ +    +   + + +P    +       L++S+ P   Y+     +    +      A+EQI ++A  EKAYAE  +   KR+
Subjt:  ELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQI-RLAAMEKAYAERVRELTKRE

Query:  IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
         E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  IELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT3G48550.1 BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3)5.9e-3556.52Show/hide
Query:  EDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGS--GGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERV
        + +  KELQLLP+P S  + S     RP+  +    ++   + S     +DL+LSISL  I   EE+  P     VEALKWQAAEQIRLAA+EKAYAERV
Subjt:  EDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGS--GGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERV

Query:  RELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP
        RELT+RE+E+AQ+EFARAR MW++AREEVE+AER+KER+  ++D+ C+EITC SCRQRFRP
Subjt:  RELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCATCCCACATGTCATCCCGTCCATCCGACTCCTCGTTACGGTTCCG
TTCCGATCCATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTAAGGCCAATCCGGCCATACGAGGAGGTGATGAAGCCGGAGGCAGCGAGCT
GTGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCT
CAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAGAGCAACTCGTCAAATGGATTCTACGTGCAT
GGAGATCACTTGCCAGTCTTGCAGGCAGAGGTTTCGGCCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATGAAGATCAGAAAGAGTTACAGCTTCTTCCAACACCACACTCCATAGCATCTTCGTCATCCCACATGTCATCCCGTCCATCCGACTCCTCGTTACGGTTCCG
TTCCGATCCATTCGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTAAGGCCAATCCGGCCATACGAGGAGGTGATGAAGCCGGAGGCAGCGAGCT
GTGTGGAGGCGCTGAAGTGGCAAGCGGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGGGAAATAGAACTGGCT
CAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAGAGCAACTCGTCAAATGGATTCTACGTGCAT
GGAGATCACTTGCCAGTCTTGCAGGCAGAGGTTTCGGCCTTCTTAA
Protein sequenceShow/hide protein sequence
MEDEDQKELQLLPTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELA
QTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS