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IVF0012318 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012318
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr08:2090780..2091139
RNA-Seq ExpressionIVF0012318
SyntenyIVF0012318
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEF40912.1 conserved hypothetical protein [Ricinus communis]9.59e-1158.33Show/hide
Query:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQ
        M  ++ +++ RR+SGR IPKRGQVK+GI+VGLA +V SIFS+SHS+++
Subjt:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQ

GAY34397.1 hypothetical protein CUMW_011210 [Citrus unshiu]5.01e-0961.22Show/hide
Query:  INGQRLGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ
        ING  + RR+     SGR IPKRGQVKM I+VGLA +V SIFS+SHS +
Subjt:  INGQRLGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ

KAA0052717.1 hypothetical protein E6C27_scaffold120G003300 [Cucumis melo var. makuwa]3.65e-32100Show/hide
Query:  MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH
        MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH
Subjt:  MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH

KAG5010543.1 hypothetical protein JHK87_019058 [Glycine soja]6.78e-0960.78Show/hide
Query:  AKMMNNINGQR-LGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ
        A+    ING R   RR SGR IPKRGQVK+GI+VGLA +V SIFS S +T+
Subjt:  AKMMNNINGQR-LGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ

KAG7026593.1 Anaphase-promoting complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma]5.18e-1570Show/hide
Query:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH
        MNNING+R+ RRI GR IPKRGQVKMGIMVG+  TVTSIFS+ H     H
Subjt:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH

TrEMBL top hitse value%identityAlignment
A0A2H5N387 Uncharacterized protein1.1e-0461.22Show/hide
Query:  INGQRLGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ
        ING  + RR+     SGR IPKRGQVKM I+VGLA +V SIFS+SHS +
Subjt:  INGQRLGRRI-----SGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ

A0A445JYT4 Retrovirus-related Pol polyprotein from transposon RE11.5e-0460.78Show/hide
Query:  AKMMNNINGQR-LGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ
        A+    ING R   RR SGR IPKRGQVK+GI+VGLA +V SIFS S +T+
Subjt:  AKMMNNINGQR-LGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ

A0A5A7UDZ4 Uncharacterized protein4.6e-22100Show/hide
Query:  MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH
        MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH
Subjt:  MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH

B9S603 Uncharacterized protein7.9e-0658.33Show/hide
Query:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQ
        M  ++ +++ RR+SGR IPKRGQVK+GI+VGLA +V SIFS+SHS+++
Subjt:  MNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQ

K7L2M4 Uncharacterized protein1.5e-0460.78Show/hide
Query:  AKMMNNINGQR-LGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ
        A+    ING R   RR SGR IPKRGQVK+GI+VGLA +V SIFS S +T+
Subjt:  AKMMNNINGQR-LGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGAAGCTAAGATGATGAACAACATCAACGGTCAGAGATTGGGAAGGAGAATTTCTGGGCGTTTGATCCCAAAGAGAGGGCAAGTGAAGATGGGAATCATGGT
GGGGTTGGCTCAAACTGTCACTTCTATCTTCTCTAACAGTCACAGTACTCAACAACAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATTTAAGTCCACCTCATTTAGCCTTTCGGAGCATCCAACACTTCAACACCAACAAAAAAAAAAAAAAAAAAAAAAAAATCTTCTACTTCTTCTTAAACTGATATCTCTAG
AAGATGGGTGAAGAAGCTAAGATGATGAACAACATCAACGGTCAGAGATTGGGAAGGAGAATTTCTGGGCGTTTGATCCCAAAGAGAGGGCAAGTGAAGATGGGAATCAT
GGTGGGGTTGGCTCAAACTGTCACTTCTATCTTCTCTAACAGTCACAGTACTCAACAACAACATTGAACATTTAGATAGACACAAACGTACATAGCTTCTATGTAATTTT
GAGGTTGAAGAGATTAAGGTTGTAAATTTG
Protein sequenceShow/hide protein sequence
MGEEAKMMNNINGQRLGRRISGRLIPKRGQVKMGIMVGLAQTVTSIFSNSHSTQQQH