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IVF0012320 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012320
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionGag-pol polyprotein
Genome locationchr08:17028141..17028615
RNA-Seq ExpressionIVF0012320
SyntenyIVF0012320
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035757.1 gag-pol polyprotein [Cucumis melo var. makuwa]1.28e-8991.72Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
        MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRD+NSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITL MKQVSKLRSQFNKQFGNYGSQNNKDFGSS
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS

Query:  SSSSFETYVPINEGRMTKVTETLEPTE-----------DLGTMKQNALPFSKERRRV
        SSSSFETYVPINEGRMTKVTETLEPTE           DLGTMKQNALPFSKERRRV
Subjt:  SSSSFETYVPINEGRMTKVTETLEPTE-----------DLGTMKQNALPFSKERRRV

KAA0065593.1 gag-pol polyprotein [Cucumis melo var. makuwa]6.76e-2955.86Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
        MKV +I+EANDI TMK+D+LFGSLRTF+L L D   KK++G+ALQ ++++ P+  KE+IHDD+LA S  L  KQVSKLRSQF+K+  NY + +N++F  S
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS

Query:  ---SSSSFETY
            SSSF +Y
Subjt:  ---SSSSFETY

KAA0067010.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.89e-2250Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
        MKVT +KEANDI TMK+D+LFGSLRTF+L+L D+  KK++G+A Q +S+D+   +++Q  D++LA+ + L   +  K +S+F K+ G +G+Q NKDF +S
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS

Query:  SSSS
        +SSS
Subjt:  SSSS

TYK29697.1 Receptor-like protein 12 [Cucumis melo var. makuwa]1.80e-2047.79Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNK-DFGS
        MKVTII+EANDI T K+D+LFGSLRTF+L+L D+  KK++ + +Q VSED  + + +Q  D++LA ++ L  ++ SK +S+F K+ G +G+Q+NK +F +
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNK-DFGS

Query:  SSSS---SFETYV
        SS+S   SF ++V
Subjt:  SSSS---SFETYV

TYK29861.1 gag-pol polyprotein [Cucumis melo var. makuwa]7.01e-77100Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
        MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS

Query:  SSSSFETYVPINEGRMTKVTETLEPTE
        SSSSFETYVPINEGRMTKVTETLEPTE
Subjt:  SSSSFETYVPINEGRMTKVTETLEPTE

TrEMBL top hitse value%identityAlignment
A0A5A7T2G5 Gag-pol polyprotein3.7e-6891.72Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
        MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRD+NSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITL MKQVSKLRSQFNKQFGNYGSQNNKDFGSS
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS

Query:  SSSSFETYVPINEGRMTKVTETLEPTE-----------DLGTMKQNALPFSKERRRV
        SSSSFETYVPINEGRMTKVTETLEPTE           DLGTMKQNALPFSKERRRV
Subjt:  SSSSFETYVPINEGRMTKVTETLEPTE-----------DLGTMKQNALPFSKERRRV

A0A5A7VIH3 Putative mitochondrial protein4.6e-1850Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
        MKVT +KEANDI TMK+D+LFGSLRTF+L+L D+  KK++G+A Q +S+D+   +++Q  D++LA+ + L   +  K +S+F K+ G +G+Q NKDF +S
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS

Query:  SSSS
        +SSS
Subjt:  SSSS

A0A5D3C743 Gag-pol polyprotein6.9e-2255.86Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
        MKV +I+EANDI TMK+D+LFGSLRTF+L L D   KK++G+ALQ ++++ P+  KE+IHDD+LA S  L  KQVSKLRSQF+K+  NY + +N++F  S
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS

Query:  ---SSSSFETY
            SSSF +Y
Subjt:  ---SSSSFETY

A0A5D3E0S6 Receptor-like protein 125.6e-1646.02Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNK----D
        MKVTII+EANDI T K+D+LFGSLRTF+L+L D+  KK++ + +Q VSED  + + +Q  D++LA ++ L  ++ SK +S+F K+ G +G+Q+NK    +
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNK----D

Query:  FGSSSSSSFETYV
          +S S SF ++V
Subjt:  FGSSSSSSFETYV

A0A5D3E2N4 Gag-pol polyprotein9.8e-61100Show/hide
Query:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
        MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS
Subjt:  MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSS

Query:  SSSSFETYVPINEGRMTKVTETLEPTE
        SSSSFETYVPINEGRMTKVTETLEPTE
Subjt:  SSSSFETYVPINEGRMTKVTETLEPTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTCACTATCATAAAAGAAGCAAATGATATTGCCACGATGAAAGTTGATAAGCTATTTGGTTCTTTAAGAACCTTTAAGTTGAATTTGAGAGACAGTAACTCCAA
AAAGAGAAATGGAGTTGCCTTACAATCTGTGAGTGAGGATGATCCCGAACAACATAAAGAACAGATTCATGATGATCACTTAGCTGACTCCATTACTCTCTCAATGAAGC
AAGTTTCAAAACTAAGAAGTCAATTTAACAAGCAGTTTGGAAATTATGGAAGCCAAAACAACAAAGATTTTGGCAGTTCAAGCTCTTCTAGCTTCGAAACCTACGTGCCA
ATAAACGAAGGGAGAATGACAAAGGTGACAGAAACTTTAGAACCTACAGAGGATTTAGGCACTATGAAGCAGAATGCCCTACCTTTCTCAAAAGAAAGAAGAAGAGTCTG
A
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTCACTATCATAAAAGAAGCAAATGATATTGCCACGATGAAAGTTGATAAGCTATTTGGTTCTTTAAGAACCTTTAAGTTGAATTTGAGAGACAGTAACTCCAA
AAAGAGAAATGGAGTTGCCTTACAATCTGTGAGTGAGGATGATCCCGAACAACATAAAGAACAGATTCATGATGATCACTTAGCTGACTCCATTACTCTCTCAATGAAGC
AAGTTTCAAAACTAAGAAGTCAATTTAACAAGCAGTTTGGAAATTATGGAAGCCAAAACAACAAAGATTTTGGCAGTTCAAGCTCTTCTAGCTTCGAAACCTACGTGCCA
ATAAACGAAGGGAGAATGACAAAGGTGACAGAAACTTTAGAACCTACAGAGGATTTAGGCACTATGAAGCAGAATGCCCTACCTTTCTCAAAAGAAAGAAGAAGAGTCTG
A
Protein sequenceShow/hide protein sequence
MKVTIIKEANDIATMKVDKLFGSLRTFKLNLRDSNSKKRNGVALQSVSEDDPEQHKEQIHDDHLADSITLSMKQVSKLRSQFNKQFGNYGSQNNKDFGSSSSSSFETYVP
INEGRMTKVTETLEPTEDLGTMKQNALPFSKERRRV