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IVF0012324 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012324
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationchr01:21807181..21807392
RNA-Seq ExpressionIVF0012324
SyntenyIVF0012324
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026280.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.41e-1871.01Show/hide
Query:  MESGESDAESSRPHVEGNMEEQLS-------------AQSNHEKKYGIERLKALGATTFAGTTNPADAE
        M SGESDAESSRPHVEGN+EEQL              AQS+ EKKYGIERLKALGATTF GTTNP DAE
Subjt:  MESGESDAESSRPHVEGNMEEQLS-------------AQSNHEKKYGIERLKALGATTFAGTTNPADAE

KAA0035225.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.08e-2075.71Show/hide
Query:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA
        M SGESDAESSRPHVEGNMEEQL             SAQS+ EKKYGIERLKALGATTF GTTNPADAEA
Subjt:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA

KAA0036813.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.13e-1668.57Show/hide
Query:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA
        M SGESDAESSRP VE N+EEQL             SAQS+ EKKYG ERLKALGATTFAGTTNP D EA
Subjt:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA

KAA0056913.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]7.65e-1565.71Show/hide
Query:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA
        MES E DAESSRPHVEGN+EEQL             S QS+ EKK+ IERLKALG+TTFA TTNPA+AEA
Subjt:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA

TYJ95881.1 retrotransposon protein, putative, Ty3-gypsy subclass [Cucumis melo var. makuwa]3.13e-1668.57Show/hide
Query:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA
        M SGESDAESSRP VE N+EEQL             SAQS+ EKKYG ERLKALGATTFAGTTNP D EA
Subjt:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA

TrEMBL top hitse value%identityAlignment
A0A5A7SJ99 DNA/RNA polymerases superfamily protein1.7e-1371.01Show/hide
Query:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAE
        M SGESDAESSRPHVEGN+EEQL              AQS+ EKKYGIERLKALGATTF GTTNP DAE
Subjt:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAE

A0A5A7T1M0 Reverse transcriptase4.3e-1268.57Show/hide
Query:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA
        M SGESDAESSRP VE N+EEQL             SAQS+ EKKYG ERLKALGATTFAGTTNP D EA
Subjt:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA

A0A5A7ULX5 DNA/RNA polymerases superfamily protein8.1e-1165.71Show/hide
Query:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA
        MES E DAESSRPHVEGN+EEQL             S QS+ EKK+ IERLKALG+TTFA TTNPA+AEA
Subjt:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA

A0A5D3BB91 Reverse transcriptase4.3e-1268.57Show/hide
Query:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA
        M SGESDAESSRP VE N+EEQL             SAQS+ EKKYG ERLKALGATTFAGTTNP D EA
Subjt:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA

A0A5D3DES5 DNA/RNA polymerases superfamily protein2.4e-1575.71Show/hide
Query:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA
        M SGESDAESSRPHVEGNMEEQL             SAQS+ EKKYGIERLKALGATTF GTTNPADAEA
Subjt:  MESGESDAESSRPHVEGNMEEQL-------------SAQSNHEKKYGIERLKALGATTFAGTTNPADAEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGTGGGGAGTCTGATGCCGAATCTAGTCGCCCTCATGTTGAAGGGAATATGGAAGAACAATTATCGGCACAATCAAACCATGAAAAGAAGTATGGGATTGAGAG
ATTGAAAGCCTTGGGTGCTACTACTTTTGCGGGGACAACAAATCCCGCCGATGCTGAAGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGTGGGGAGTCTGATGCCGAATCTAGTCGCCCTCATGTTGAAGGGAATATGGAAGAACAATTATCGGCACAATCAAACCATGAAAAGAAGTATGGGATTGAGAG
ATTGAAAGCCTTGGGTGCTACTACTTTTGCGGGGACAACAAATCCCGCCGATGCTGAAGCATGA
Protein sequenceShow/hide protein sequence
MESGESDAESSRPHVEGNMEEQLSAQSNHEKKYGIERLKALGATTFAGTTNPADAEA