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IVF0012335 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012335
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionnuclear pore complex protein NUP160
Genome locationchr05:9039436..9041054
RNA-Seq ExpressionIVF0012335
SyntenyIVF0012335
Gene Ontology termsGO:0006913 - nucleocytoplasmic transport (biological process)
GO:0033036 - macromolecule localization (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0071702 - organic substance transport (biological process)
GO:0071705 - nitrogen compound transport (biological process)
GO:0005643 - nuclear pore (cellular component)
InterPro domainsIPR021717 - Nucleoporin Nup120/160


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ95576.1 nuclear pore complex protein NUP160 isoform X4 [Cucumis melo var. makuwa]1.70e-92100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
XP_008457193.1 PREDICTED: nuclear pore complex protein NUP160 isoform X2 [Cucumis melo]9.17e-83100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
XP_008457194.1 PREDICTED: nuclear pore complex protein NUP160 isoform X3 [Cucumis melo]9.16e-83100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
XP_008457195.1 PREDICTED: nuclear pore complex protein NUP160 isoform X4 [Cucumis melo]9.06e-83100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
XP_008457197.1 PREDICTED: nuclear pore complex protein NUP160 isoform X5 [Cucumis melo]9.01e-83100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
TrEMBL top hitse value%identityAlignment
A0A1S3C4Y2 nuclear pore complex protein NUP160 isoform X24.2e-71100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
A0A1S3C516 nuclear pore complex protein NUP160 isoform X54.2e-71100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
A0A1S3C5M5 nuclear pore complex protein NUP160 isoform X34.2e-71100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
A0A1S3C685 nuclear pore complex protein NUP160 isoform X44.2e-71100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
A0A5D3B9M7 Nuclear pore complex protein NUP160 isoform X44.2e-71100Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
        EKLRNLLHGALLNHMKLLKVEGDDILSAVA
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSAVA
SwissProt top hitse value%identityAlignment
Q9C811 Nuclear pore complex protein NUP1602.4e-3957.03Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        +ELPLWL+ MFKDG++ K  GM G+E++PASLF+LYV+YGR TEAT+LLLE MESFAS  PA+++ RK+   V FPY  V+ LW ++++ + SG MV+ C
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSA
         KL+  LH ALLNH+KLLKV+ +D +S+
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSA
Arabidopsis top hitse value%identityAlignment
AT1G33410.1 SUPPRESSOR OF AUXIN RESISTANCE13.5e-3853.28Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFAS---------MGPADIINRKRPFSVCFPYNAVQYLWCKIDELI
        +ELPLWL+ MFKDG++ K  GM G+E++PASLF+LYV+YGR TEAT+LLLE MESFAS           PA+++ RK+   V FPY  V+ LW ++++ +
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFAS---------MGPADIINRKRPFSVCFPYNAVQYLWCKIDELI

Query:  RSGHMVDACEKLRNLLHGALLNHMKLLKVEGDDILSA
         SG MV+ C KL+  LH ALLNH+KLLKV+ +D +S+
Subjt:  RSGHMVDACEKLRNLLHGALLNHMKLLKVEGDDILSA
AT1G33410.2 SUPPRESSOR OF AUXIN RESISTANCE11.7e-4057.03Show/hide
Query:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC
        +ELPLWL+ MFKDG++ K  GM G+E++PASLF+LYV+YGR TEAT+LLLE MESFAS  PA+++ RK+   V FPY  V+ LW ++++ + SG MV+ C
Subjt:  MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDAC

Query:  EKLRNLLHGALLNHMKLLKVEGDDILSA
         KL+  LH ALLNH+KLLKV+ +D +S+
Subjt:  EKLRNLLHGALLNHMKLLKVEGDDILSA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTGCCTCTTTGGCTGGTTCTCATGTTTAAGGATGGTAGAAGGCCAAAGACATGGGGGATGACTGGTGAAGAATCAAATCCAGCATCGTTGTTTCGATTATATGT
TGAATATGGTCGATATACAGAGGCTACCCATCTGTTGCTTGAATGCATGGAATCATTTGCATCAATGGGACCAGCAGACATAATTAATCGAAAAAGACCATTCTCTGTTT
GCTTCCCCTACAACGCCGTTCAGTACTTATGGTGCAAAATAGATGAATTGATCCGCTCAGGTCACATGGTAGATGCTTGTGAGAAGCTGAGAAACCTATTGCATGGTGCT
TTGTTGAATCATATGAAGCTGCTTAAAGTCGAGGGAGATGATATCTTATCTGCCGTCGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTGCCTCTTTGGCTGGTTCTCATGTTTAAGGATGGTAGAAGGCCAAAGACATGGGGGATGACTGGTGAAGAATCAAATCCAGCATCGTTGTTTCGATTATATGT
TGAATATGGTCGATATACAGAGGCTACCCATCTGTTGCTTGAATGCATGGAATCATTTGCATCAATGGGACCAGCAGACATAATTAATCGAAAAAGACCATTCTCTGTTT
GCTTCCCCTACAACGCCGTTCAGTACTTATGGTGCAAAATAGATGAATTGATCCGCTCAGGTCACATGGTAGATGCTTGTGAGAAGCTGAGAAACCTATTGCATGGTGCT
TTGTTGAATCATATGAAGCTGCTTAAAGTCGAGGGAGATGATATCTTATCTGCCGTCGCTTAA
Protein sequenceShow/hide protein sequence
MELPLWLVLMFKDGRRPKTWGMTGEESNPASLFRLYVEYGRYTEATHLLLECMESFASMGPADIINRKRPFSVCFPYNAVQYLWCKIDELIRSGHMVDACEKLRNLLHGA
LLNHMKLLKVEGDDILSAVA