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IVF0012345 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012345
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr05:9466879..9467236
RNA-Seq ExpressionIVF0012345
SyntenyIVF0012345
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043367.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.17e-3864.71Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS
        MTSDKELFK L  +  S++KIGN  YLEVKGKG VS +SCAGTKLIT+VLF+ EIDQNLL+VGQLVEK FK+LFE+ K          LFKINMQ K+FS
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS

Query:  LDPLEKEKVVFKYQLYDTE
        L+ LE+E+V FK Q+ DT+
Subjt:  LDPLEKEKVVFKYQLYDTE

TYJ98110.1 putative transposon Ty5-1 protein YCL075W family [Cucumis melo var. makuwa]1.52e-3866.39Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS
        MTSDKELFK L  +  SR+KIGN+ YLEVKGKG VS +SCAGTKLIT+VLF+PEIDQNLL+VGQLVEK FK+LFE+ K          LFKINMQ+K+FS
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS

Query:  LDPLEKEKVVFKYQLYDTE
        L+ LE+E+V FK Q+ DT+
Subjt:  LDPLEKEKVVFKYQLYDTE

XP_038885771.1 uncharacterized protein LOC120076063 [Benincasa hispida]6.65e-4270Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEK----------KKLFKINMQQKTFS
        MTSDKELFK L  +  SR+KIGN+ YLEVKGK  VSIESC  TKLITEVLFVPEIDQNLLSVGQLVEKGFK+LFEK           KLFKI MQ   F 
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEK----------KKLFKINMQQKTFS

Query:  LDPLEKEKVVFKYQLYDTEL
        LDPLEKE++ FK Q+ DTEL
Subjt:  LDPLEKEKVVFKYQLYDTEL

XP_038890984.1 uncharacterized protein LOC120080400 [Benincasa hispida]7.56e-4071.3Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS
        MTSDKELFK L  +  SR+KIGN  YLEVKGKGIVSIESCAGTKLIT+VLFVPEIDQNLLSVGQLVEKGFK+LFE+ K          L KI MQ K+FS
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS

Query:  LDPLEKEKVVFKYQL
        LDPLEK+++ FK Q+
Subjt:  LDPLEKEKVVFKYQL

XP_038902496.1 uncharacterized protein LOC120089156 [Benincasa hispida]3.06e-4071.3Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS
        MTSDKELFK L  +  SR+KIGN+ YLEVKGKG VSIESCAGTKLITEVLFVPEIDQNLLS+GQLVEKGFK+LFE++K          LFKI MQ K+FS
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS

Query:  LDPLEKEKVVFKYQL
        LDPLE E++ FK Q+
Subjt:  LDPLEKEKVVFKYQL

TrEMBL top hitse value%identityAlignment
A0A5A7TNI4 Retrovirus-related Pol polyprotein from transposon TNT 1-947.3e-2964.71Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS
        MTSDKELFK L  +  S++KIGN  YLEVKGKG VS +SCAGTKLIT+VLF+ EIDQNLL+VGQLVEK FK+LFE+ K          LFKINMQ K+FS
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS

Query:  LDPLEKEKVVFKYQLYDTE
        L+ LE+E+V FK Q+ DT+
Subjt:  LDPLEKEKVVFKYQLYDTE

A0A5B6WLL2 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-2457.98Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEK----------KKLFKINMQQKTFS
        MT  K+LFK L  +  S ++IGN  YLEV+GKG V IESC GTK I++VLFV EIDQNLLSVGQLVE GFK++FE+            LF+I MQ K+FS
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEK----------KKLFKINMQQKTFS

Query:  LDPLEKEKVVFKYQLYDTE
        L+PLE+E+V FK Q+ D+E
Subjt:  LDPLEKEKVVFKYQLYDTE

A0A5D3BE46 Putative transposon Ty5-1 protein YCL075W family2.3e-3066.39Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS
        MTSDKELFK L  +  SR+KIGN+ YLEVKGKG VS +SCAGTKLIT+VLF+PEIDQNLL+VGQLVEK FK+LFE+ K          LFKINMQ+K+FS
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKK----------LFKINMQQKTFS

Query:  LDPLEKEKVVFKYQLYDTE
        L+ LE+E+V FK Q+ DT+
Subjt:  LDPLEKEKVVFKYQLYDTE

A0A6J1DWT9 uncharacterized protein LOC1110251495.6e-2965.83Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKKL----------FKINMQQKTFS
        M SDKELFK L  +  SR+KIGN  YLEVKGK   SIESC GTKLITEVLFVP I QNLLSVGQLVEKGFK+LFE +K           FKI MQ K+FS
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKKL----------FKINMQQKTFS

Query:  LDPLEKEKVVFKYQLYDTEL
        LDP+EK+++V K Q+ DTEL
Subjt:  LDPLEKEKVVFKYQLYDTEL

A0A6P4PSP3 uncharacterized protein LOC1084815771.4e-2459.65Show/hide
Query:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEK----------KKLFKINMQQKTFS
        MT D++LFK L  +  S+++IGN  YLEVKG+G V+IESC GTKLI++VLFVPEIDQNLLSVGQLVEK FK++FE+           +LF I MQ+K+FS
Subjt:  MTSDKELFKTL--ACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEK----------KKLFKINMQQKTFS

Query:  LDPLEKEKVVFKYQ
        L+P EKE+V  K Q
Subjt:  LDPLEKEKVVFKYQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTGACAAAGAGTTGTTCAAGACCTTGGCATGTCATTCAAGGTTGAAAATAGGAAACAATGTGTATTTAGAAGTAAAGGGGAAGGGCATAGTGTCAATAGAGAG
TTGTGCTGGAACCAAGTTGATTACTGAAGTGTTATTTGTCCCTGAGATTGATCAAAACTTGTTAAGTGTTGGTCAACTAGTAGAGAAGGGATTCAAATTGTTGTTTGAAA
AAAAGAAACTCTTTAAAATAAATATGCAACAGAAGACCTTTTCGTTGGATCCACTTGAAAAAGAGAAGGTAGTTTTCAAGTATCAATTGTATGACACTGAGTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAGTGACAAAGAGTTGTTCAAGACCTTGGCATGTCATTCAAGGTTGAAAATAGGAAACAATGTGTATTTAGAAGTAAAGGGGAAGGGCATAGTGTCAATAGAGAG
TTGTGCTGGAACCAAGTTGATTACTGAAGTGTTATTTGTCCCTGAGATTGATCAAAACTTGTTAAGTGTTGGTCAACTAGTAGAGAAGGGATTCAAATTGTTGTTTGAAA
AAAAGAAACTCTTTAAAATAAATATGCAACAGAAGACCTTTTCGTTGGATCCACTTGAAAAAGAGAAGGTAGTTTTCAAGTATCAATTGTATGACACTGAGTTATAG
Protein sequenceShow/hide protein sequence
MTSDKELFKTLACHSRLKIGNNVYLEVKGKGIVSIESCAGTKLITEVLFVPEIDQNLLSVGQLVEKGFKLLFEKKKLFKINMQQKTFSLDPLEKEKVVFKYQLYDTEL