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IVF0012431 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012431
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr06:17706514..17706834
RNA-Seq ExpressionIVF0012431
SyntenyIVF0012431
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032759.1 RNA-directed DNA polymerase-like protein [Cucumis melo var. makuwa]1.50e-3373.86Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA
        MAI LVDEQ E++++PTEI KVLNEYV I+L ELPKTLP + GIDHEIELVPRTK  A NAY+M P EL +LRKQLDELLAAGFI+ A
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA

KAA0060584.1 reverse transcriptase [Cucumis melo var. makuwa]9.05e-70100Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGLLCCFKRRKM
        MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGLLCCFKRRKM
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGLLCCFKRRKM

Query:  GLYYCA
        GLYYCA
Subjt:  GLYYCA

KAA0065444.1 reverse transcriptase [Cucumis melo var. makuwa]1.56e-3566.35Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAM---GLLCCFKR
        MAI LVDEQ EI T+P EI KVLNEYV I+LPEL ++LP RRGIDH IELVP  KPP  NAYRMA PEL KLRKQLDE LA GFI+ A    G    F++
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAM---GLLCCFKR

Query:  RKMG
        +K G
Subjt:  RKMG

XP_016900833.1 PREDICTED: uncharacterized protein LOC107991048 [Cucumis melo]1.09e-3464.76Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGL---LCCFKR
        M IPLVDEQ E   +P EI KV+NEYV  +  ELPK+LP RRGIDHEIELVP+ KPPA NAYRMAP ELA+LRKQLDELLAA FIR A      LC    
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGL---LCCFKR

Query:  RKMGL
        +K+ +
Subjt:  RKMGL

XP_022930575.1 uncharacterized protein LOC111436983 [Cucurbita moschata]4.45e-3268.18Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA
        MAIPL++E T  ET+P EI +VL+ Y  I+   LP+TLP RRGIDHEIEL+P  KPPA  AYRMAPPELA+LRKQLDELL AGFI  A
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA

TrEMBL top hitse value%identityAlignment
A0A1S4DXY2 uncharacterized protein LOC1079910482.6e-2664.76Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGL---LCCFKR
        M IPLVDEQ E   +P EI KV+NEYV  +  ELPK+LP RRGIDHEIELVP+ KPPA NAYRMAP ELA+LRKQLDELLAA FIR A      LC    
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGL---LCCFKR

Query:  RKMGL
        +K+ +
Subjt:  RKMGL

A0A5A7SUC6 RNA-directed DNA polymerase-like protein9.7e-2673.86Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA
        MAI LVDEQ E++++PTEI KVLNEYV I+L ELPKTLP + GIDHEIELVPRTK  A NAY+M P EL +LRKQLDELLAAGFI+ A
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA

A0A5A7UZX4 Reverse transcriptase2.1e-52100Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGLLCCFKRRKM
        MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGLLCCFKRRKM
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGLLCCFKRRKM

Query:  GLYYCA
        GLYYCA
Subjt:  GLYYCA

A0A5A7VDT8 Reverse transcriptase5.2e-2766.35Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA---MGLLCCFKR
        MAI LVDEQ EI T+P EI KVLNEYV I+LPEL ++LP RRGIDH IELVP  KPP  NAYRMA PEL KLRKQLDE LA GFI+ A    G    F++
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA---MGLLCCFKR

Query:  RKMG
        +K G
Subjt:  RKMG

A0A6J1D906 Reverse transcriptase2.8e-2562.5Show/hide
Query:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA---MGLLCCFKR
        MAIP+V++  E   +P EI  V+ EYV I+   LPKTLP RRGIDHEIEL+P  KPPA NAYRMAPPELA+LRKQLDELL AGFIR A    G    F++
Subjt:  MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSA---MGLLCCFKR

Query:  RKMG
        +K G
Subjt:  RKMG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCCCATTGGTGGATGAGCAGACAGAAATCGAAACTATCCCAACAGAGATCCATAAAGTTCTGAATGAATATGTTGGTATTATACTACCTGAACTGCCAAAGAC
ACTACCTACTCGACGGGGGATTGATCATGAGATCGAACTTGTCCCAAGAACCAAGCCTCCAGCAAATAATGCTTATAGGATGGCTCCACCTGAGTTAGCTAAGCTTAGAA
AACAATTAGACGAATTATTAGCTGCCGGATTCATTAGATCTGCGATGGGACTTCTGTGCTGTTTCAAAAGAAGAAAGATGGGACTCTACTACTGTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATCCCATTGGTGGATGAGCAGACAGAAATCGAAACTATCCCAACAGAGATCCATAAAGTTCTGAATGAATATGTTGGTATTATACTACCTGAACTGCCAAAGAC
ACTACCTACTCGACGGGGGATTGATCATGAGATCGAACTTGTCCCAAGAACCAAGCCTCCAGCAAATAATGCTTATAGGATGGCTCCACCTGAGTTAGCTAAGCTTAGAA
AACAATTAGACGAATTATTAGCTGCCGGATTCATTAGATCTGCGATGGGACTTCTGTGCTGTTTCAAAAGAAGAAAGATGGGACTCTACTACTGTGCATAG
Protein sequenceShow/hide protein sequence
MAIPLVDEQTEIETIPTEIHKVLNEYVGIILPELPKTLPTRRGIDHEIELVPRTKPPANNAYRMAPPELAKLRKQLDELLAAGFIRSAMGLLCCFKRRKMGLYYCA