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IVF0012457 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012457
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr11:5719184..5719633
RNA-Seq ExpressionIVF0012457
SyntenyIVF0012457
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047926.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.91e-8895.97Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMY+VPIVPALVQRRRPLVQEPDQLEE DQHVEEVPPVTLTLTQ+DHSYVSPVMM+PTFGTTYYDSGVGQSSDFGR YYNSEAGRSSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI
        DLGSDPSSSYM+GHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.35e-8488.97Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMY+VPIVPA VQRRRPLVQEPDQLEEVDQH EEVPP+T T TQS+H+YVSPVMM+PTFGTTYYDSGVGQSSDFGR YYNSEAG+SSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN
        DLGSDPSSSYM+ HGRGRGEHNEYLYYEVPAAV +QSDEQQQQ+N
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN

TYK11154.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.57e-93100Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI
        DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]9.00e-8488.97Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMY+VPIVPA VQRRRPLVQEPDQLEEVDQH EEVPP+T T TQS+H+YVSPVMM+PTFGTTYYDSGVGQSSDFGR YYNSEAG+SSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN
        DLGSDPSSSYM+GHGRGRGEHNEYLYYEVPAAV EQS+E QQQ+N
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN

XP_016900498.1 PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]4.96e-8488.28Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMY+VPIVPA VQRRRPLVQE DQLEEVDQH EEVPP+T T TQS+H+YVSPVMM+PTFG TYYDSGVGQSSDFGR YYNSEAG+SSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN
        DLGSDPSSSYM+GHGRGRGEHNEYLYY+VPAAV EQSDEQQQQ+N
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN

TrEMBL top hitse value%identityAlignment
A0A5A7U115 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.9e-7395.97Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMY+VPIVPALVQRRRPLVQEPDQLEE DQHVEEVPPVTLTLTQ+DHSYVSPVMM+PTFGTTYYDSGVGQSSDFGR YYNSEAGRSSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI
        DLGSDPSSSYM+GHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI

A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.3e-6588.97Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMY+VPIVPA VQRRRPLVQEPDQLEEVDQH EEVPP+T T TQS+H+YVSPVMM+PTFGTTYYDSGVGQSSDFGR YYNSEAG+SSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN
        DLGSDPSSSYM+ HGRGRGEHNEYLYYEVPAAV +QSDEQQQQ+N
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN

A0A5D3CIZ8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.3e-76100Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI
        DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.3e-6582.32Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMY+VPIVPA VQRRRPLVQEPDQLEEVDQH EEVPP+T T TQS+H+YVSPVMM+PTFGTTYYDSGVGQSSDFGR YYNSEAG+SSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLE---------------QSDEQQQQKNQEEI
        DLGSDPSSSYM+GHGRGRGEHNEYLYYEVPAAV E               QSDEQQQQ+NQEEI
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLE---------------QSDEQQQQKNQEEI

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-6488.28Show/hide
Query:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY
        MENIHYMY+VPIVPA VQRRRPLVQE DQLEEVDQH EEVPP+T T TQS+H+YVSPVMM+PTFG TYYDSGVGQSSDFGR YYNSEAG+SSTDFGQQYY
Subjt:  MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYY

Query:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN
        DLGSDPSSSYM+GHGRGRGEHNEYLYY+VPAAV EQSDEQQQQ+N
Subjt:  DLGSDPSSSYMNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATCCACTATATGTACAATGTCCCTATTGTACCTGCTCTAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCTGATCAATTGGAAGAAGTTGACCAACACGT
GGAAGAAGTGCCTCCCGTGACACTGACACTGACACAAAGCGATCATAGTTACGTTAGTCCAGTAATGATGATTCCAACATTTGGAACGACATATTATGATTCAGGAGTCG
GTCAATCGTCAGACTTTGGAAGAGTATATTACAATTCAGAGGCAGGTCGATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGTGATCCATCGTCTTCATAC
ATGAATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACTCGAGCAATCAGATGAGCAACAGCAACAAAAGAATCAAGA
GGAAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACATCCACTATATGTACAATGTCCCTATTGTACCTGCTCTAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGCCTGATCAATTGGAAGAAGTTGACCAACACGT
GGAAGAAGTGCCTCCCGTGACACTGACACTGACACAAAGCGATCATAGTTACGTTAGTCCAGTAATGATGATTCCAACATTTGGAACGACATATTATGATTCAGGAGTCG
GTCAATCGTCAGACTTTGGAAGAGTATATTACAATTCAGAGGCAGGTCGATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGTGATCCATCGTCTTCATAC
ATGAATGGTCACGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGGTACTCGAGCAATCAGATGAGCAACAGCAACAAAAGAATCAAGA
GGAAATATAA
Protein sequenceShow/hide protein sequence
MENIHYMYNVPIVPALVQRRRPLVQEPDQLEEVDQHVEEVPPVTLTLTQSDHSYVSPVMMIPTFGTTYYDSGVGQSSDFGRVYYNSEAGRSSTDFGQQYYDLGSDPSSSY
MNGHGRGRGEHNEYLYYEVPAAVLEQSDEQQQQKNQEEI