CuGenDBv2

Gene ID	IVF0012465
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Cysteine-rich PDZ-binding protein
Genome location	chr08:2363545..2365231
RNA-Seq Expression	IVF0012465
Synteny	IVF0012465
Gene Ontology terms	GO:0031122 - cytoplasmic microtubule organization (biological process) GO:0005737 - cytoplasm (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR019367 - PDZ-binding protein, CRIPT

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134750.1 cysteine-rich PDZ-binding protein [Cucumis sativus]

1.35e-67

100

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_021887355.1 cysteine-rich PDZ-binding protein [Carica papaya]

2.63e-65

96.88

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNT E+GGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_022142069.1 cysteine-rich PDZ-binding protein [Momordica charantia]

3.74e-65

95.83

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKL+KVIVPDKWKEGASNT ESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQV+DTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_022950220.1 cysteine-rich PDZ-binding protein [Cucurbita moschata]

1.11e-66

98.96

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

XP_038882901.1 cysteine-rich PDZ-binding protein [Benincasa hispida]

1.11e-66

98.96

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQD KYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHE3 Cysteine-rich PDZ-binding protein

1.4e-50

100

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A1S3B0M5 Cysteine-rich PDZ-binding protein

1.4e-50

100

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A5D3CPV5 Cysteine-rich PDZ-binding protein

1.4e-50

100

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A6J1GF41 Cysteine-rich PDZ-binding protein

6.7e-50

98.96

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

A0A6J1IVK1 Cysteine-rich PDZ-binding protein

6.7e-50

98.96

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

SwissProt top hits

e value

%identity

Alignment

O70333 Cysteine-rich PDZ-binding protein

2.1e-32

68.32

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL +VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ G  YC  CAY KG+CAMCGK+VLDTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Q3ZC66 Cysteine-rich PDZ-binding protein

4.6e-32

68.32

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL  VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ G  YC  CAY KG+CAMCGK+VLDTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Q567Z6 Cysteine-rich PDZ-binding protein

4.6e-32

66.34

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLL-SKKKRWTPYGNT---KCIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL +VI PD WK+GA NT ESGGRK+NENK+L SKK R+ PYG +    C ICK  VHQ G  YC  CAY KG+CAMCGK+V+DTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLL-SKKKRWTPYGNT---KCIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Q792Q4 Cysteine-rich PDZ-binding protein

2.1e-32

68.32

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL +VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ G  YC  CAY KG+CAMCGK+VLDTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Q9P021 Cysteine-rich PDZ-binding protein

4.6e-32

68.32

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Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN
        MVCEKCEKKL  VI PD WK+GA NT ESGGRK+NENK L SKK R+ PYG  K   C ICK  VHQ G  YC  CAY KG+CAMCGK+VLDTK YKQ++
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENK-LLSKKKRWTPYGNTK---CIICKQQVHQDGK-YCHTCAYSKGVCAMCGKQVLDTKFYKQSN

Query:  V
        V
Subjt:  V

Arabidopsis top hits

e value

%identity

Alignment

AT1G61780.1 postsynaptic protein-related

2.6e-46

85.71

Show/hide

Query:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYG--NTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV
        MVC+KCEKKLSKVIVPDKWK+GA N  E GGRKINENKLLSKK RW+PY    TKC+ICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTK YKQSNV
Subjt:  MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYG--NTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGTCTGCGAGAAGTGTGAAAAGAAGCTATCGAAGGTGATAGTGCCGGACAAGTGGAAAGAAGGTGCAAGCAACACACAAGAAAGCGGTGGCCGTAAAATTAACGAAAA
CAAGCTCCTCTCCAAGAAGAAAAGGTGGACTCCTTATGGAAACACCAAGTGCATAATTTGTAAGCAGCAGGTACATCAGGATGGGAAGTATTGTCACACATGTGCTTACA
GCAAAGGGGTTTGTGCTATGTGTGGGAAGCAAGTACTTGACACCAAGTTTTACAAACAGAGCAACGTGTAA

mRNA sequence

Show/hide mRNA sequence

GGAAATTTTTAGAACACAAATGAATAAATTTGAGAATAAAACATTAAACATTAGCGGATAACATAAATAAAAGGGTTATGAATCTAAGATTTGCCATTTCCGACCCTTTT
ATTTTCCTTTTACAATTTTGACGAAAATCTGGTCCATTCCTCTTCGTTTTCCTTCATAGATTTCTAATTAGGGCTCTGATCACATCCGTTTCTATATTCAATTTCAACAT
CGTCTAACCAGCAGTTTAGCCATGGTCTGCGAGAAGTGTGAAAAGAAGCTATCGAAGGTGATAGTGCCGGACAAGTGGAAAGAAGGTGCAAGCAACACACAAGAAAGCGG
TGGCCGTAAAATTAACGAAAACAAGCTCCTCTCCAAGAAGAAAAGGTGGACTCCTTATGGAAACACCAAGTGCATAATTTGTAAGCAGCAGGTACATCAGGATGGGAAGT
ATTGTCACACATGTGCTTACAGCAAAGGGGTTTGTGCTATGTGTGGGAAGCAAGTACTTGACACCAAGTTTTACAAACAGAGCAACGTGTAATTAGTAGCCAGAATTGAT
ATTCAACTTGTAACTTTATCATCAGGGGTTAACGACATGTACTTCGATCCTGATGTAATTTTCATCCCGGTATCCATCTATAGTAAATGACTAATAGTTCCTTCAATTTC
CTGATCCGACTTGAAGTGTAATTCAACCCAGAATTAACATTTGTTTGTTTAATGAGATTTATGTATTATAAAATTCTACTTTCCTTTCCTTGCTAATGCAGTTATGACCT
AATCTTTTACCCGATGTGATTGTTGTTGAGTTCTTTTCTTGAATAA

Protein sequence

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MVCEKCEKKLSKVIVPDKWKEGASNTQESGGRKINENKLLSKKKRWTPYGNTKCIICKQQVHQDGKYCHTCAYSKGVCAMCGKQVLDTKFYKQSNV

IVF0012465 (gene) of Melon (IVF77) v1 genome