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IVF0012481 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012481
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr08:10010281..10010532
RNA-Seq ExpressionIVF0012481
SyntenyIVF0012481
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043551.1 uncharacterized protein E6C27_scaffold335G00530 [Cucumis melo var. makuwa]8.22e-1754.43Show/hide
Query:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKS--YFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKC
        +RIEKCL E DEEKM +GE+SS  +D+ +EKE ++EA   +  +F Q S+WF D+RPR  ECG RHM  Y+ +II FKC
Subjt:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKS--YFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKC

KAA0043557.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]1.83e-1056.45Show/hide
Query:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKS--YFSQRSYWFDDQRPRSQEC
        +RIEKCL E DEEKM +GE+SS  +D+G+EKE ++EA   +  YF Q S+WF D+RPR  EC
Subjt:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKS--YFSQRSYWFDDQRPRSQEC

KAA0054739.1 uncharacterized protein E6C27_scaffold437G00090 [Cucumis melo var. makuwa]1.67e-2062.65Show/hide
Query:  EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKCG-LDITR
        EKCLAE DEEKM K EKSS R+D+ KEK  S+E    AKS FSQR +WFD +RP+ QECG++H  T +H II FKCG LDIT+
Subjt:  EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKCG-LDITR

TYJ99705.1 uncharacterized protein E5676_scaffold562G001040 [Cucumis melo var. makuwa]1.89e-2062.65Show/hide
Query:  EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKCG-LDITR
        EKCLAE DEEKM K EKSS R+D+ KEK  S+E    AKS FSQR +WFD +RP+ QECG++H  T +H II FKCG LDIT+
Subjt:  EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKCG-LDITR

TYK02484.1 Retrotransposon gag protein [Cucumis melo var. makuwa]1.43e-0751.56Show/hide
Query:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKSYFS--QRSYWFDDQRPRSQECGR
        +RIEKCL E DEEKM +GE+SS  +D+G+EKE ++EA   + F   Q S+WF D RPR +  G+
Subjt:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKSYFS--QRSYWFDDQRPRSQECGR

TrEMBL top hitse value%identityAlignment
A0A5A7TP59 Zf-CCHC domain-containing protein6.1e-0756.45Show/hide
Query:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQEC
        +RIEKCL E DEEKM +GE+SS  +D+G+EKE ++EA      YF Q S+WF D+RPR  EC
Subjt:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQEC

A0A5A7TPS8 Retrotrans_gag domain-containing protein2.8e-1254.43Show/hide
Query:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKC
        +RIEKCL E DEEKM +GE+SS  +D+ +EKE ++EA      +F Q S+WF D+RPR  ECG RHM  Y+ +II FKC
Subjt:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKC

A0A5A7UMQ3 Uncharacterized protein2.1e-1562.65Show/hide
Query:  EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKCG-LDITR
        EKCLAE DEEKM K EKSS R+D+ KEK  S+E    AKS FSQR +WFD +RP+ QECG++H  T +H II FKCG LDIT+
Subjt:  EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKCG-LDITR

A0A5D3BN18 Uncharacterized protein2.1e-1562.65Show/hide
Query:  EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKCG-LDITR
        EKCLAE DEEKM K EKSS R+D+ KEK  S+E    AKS FSQR +WFD +RP+ QECG++H  T +H II FKCG LDIT+
Subjt:  EKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEAR--AKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKCG-LDITR

A0A5D3BTI8 Retrotransposon gag protein4.3e-0550.77Show/hide
Query:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKSY--FSQRSYWFDDQRPRSQECGRR
        +RIEKCL E DEEKM +GE+SS  +D+G+EKE ++EA   +   F Q S+WF D RPR +  G++
Subjt:  MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKSY--FSQRSYWFDDQRPRSQECGRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCATTGAAAAGTGTTTGGCTGAGAGAGATGAAGAGAAAATGTCGAAAGGAGAGAAGTCAAGCCTGAGGGTGGACAAAGGAAAAGAAAAGGAAATAAGCGAGGAAGC
ACGGGCCAAGTCATACTTTAGTCAAAGATCGTATTGGTTCGATGATCAGAGGCCAAGAAGTCAAGAGTGTGGGAGAAGGCACATGAGGACATATAAACACGACATCATTT
ACTTTAAGTGTGGGCTGGACATTACGAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCATTGAAAAGTGTTTGGCTGAGAGAGATGAAGAGAAAATGTCGAAAGGAGAGAAGTCAAGCCTGAGGGTGGACAAAGGAAAAGAAAAGGAAATAAGCGAGGAAGC
ACGGGCCAAGTCATACTTTAGTCAAAGATCGTATTGGTTCGATGATCAGAGGCCAAGAAGTCAAGAGTGTGGGAGAAGGCACATGAGGACATATAAACACGACATCATTT
ACTTTAAGTGTGGGCTGGACATTACGAGATGA
Protein sequenceShow/hide protein sequence
MRIEKCLAERDEEKMSKGEKSSLRVDKGKEKEISEEARAKSYFSQRSYWFDDQRPRSQECGRRHMRTYKHDIIYFKCGLDITR