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IVF0012492 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012492
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr03:12813355..12813603
RNA-Seq ExpressionIVF0012492
SyntenyIVF0012492
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033551.1 retrotransposon protein [Cucumis melo var. makuwa]2.15e-1750Show/hide
Query:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        M  RSG+S+D R GS+ Q+RK  MQ FE+ DLI +CM+ A DQL+TIAEWP K ++WED M  + I  +E +  L++ + SK
Subjt:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

KAA0048148.1 retrotransposon protein [Cucumis melo var. makuwa]1.43e-2054.88Show/hide
Query:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        M  RSG+SSD R GSS Q+RK  MQ FE+ DLIR+CM+ A DQL+TIAEWP KA++WEDTM  + I  ++ +  L++ + SK
Subjt:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

KAA0051928.1 retrotransposon protein [Cucumis melo var. makuwa]1.59e-2259.76Show/hide
Query:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        M  R GQS+ AR  S+ Q+RK DMQPFE+ DL RD MD ANDQ++ IA+WP++AI+ ED MV E IT++E + GLS+EDISK
Subjt:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

KAA0063919.1 retrotransposon protein [Cucumis melo var. makuwa]6.79e-45100Show/hide
Query:  SSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        SSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
Subjt:  SSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

TYK02844.1 retrotransposon protein [Cucumis melo var. makuwa]7.75e-1552.44Show/hide
Query:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        M  RS QSSDAR  SS Q+RK  MQ  E+ DLIR CM+ A DQL+TI EWP KA++ ED M ++ I   E++  L+I + SK
Subjt:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

TrEMBL top hitse value%identityAlignment
A0A5A7TYU4 Retrotransposon protein1.6e-1554.88Show/hide
Query:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        M  RSG+SSD R GSS Q+RK  MQ FE+ DLIR+CM+ A DQL+TIAEWP KA++WEDTM  + I  ++ +  L++ + SK
Subjt:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

A0A5D3B9T0 Retrotransposon protein3.3e-1350Show/hide
Query:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        M  RSG+S+D R GS+ Q+RK  MQ FE+ DLI +CM+ A DQL+TIAEWP K ++WED M  + I  +E +  L++ + SK
Subjt:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

A0A5D3BUJ4 Retrotransposon protein3.1e-1152.44Show/hide
Query:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        M  RS QSSDAR  SS Q+RK  MQ  E+ DLIR CM+ A DQL+TI EWP KA++ ED M ++ I   E++  L+I + SK
Subjt:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

A0A5D3CHE3 Retrotransposon protein4.4e-3498.68Show/hide
Query:  QSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        +SSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
Subjt:  QSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

A0A5D3CM76 Retrotransposon protein1.4e-1659.76Show/hide
Query:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK
        M  R GQS+ AR  S+ Q+RK DMQPFE+ DL RD MD ANDQ++ IA+WP++AI+ ED MV E IT++E + GLS+EDISK
Subjt:  MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGATCGATCTGGTCAGTCGAGCGACGCTAGGCCAGGCTCTAGCAATCAGGAAAGGAAGGGTGACATGCAGCCGTTCGAGAGTGACGACCTGATTCGAGATTGCAT
GGACACTGCGAATGATCAGCTTAAGACCATTGCGGAATGGCCTAATAAAGCTATCAACTGGGAAGACACAATGGTATTAGAGTTTATTACGTATATGGAGACTCTCCTGG
GCCTTAGTATTGAGGACATCAGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGATCGATCTGGTCAGTCGAGCGACGCTAGGCCAGGCTCTAGCAATCAGGAAAGGAAGGGTGACATGCAGCCGTTCGAGAGTGACGACCTGATTCGAGATTGCAT
GGACACTGCGAATGATCAGCTTAAGACCATTGCGGAATGGCCTAATAAAGCTATCAACTGGGAAGACACAATGGTATTAGAGTTTATTACGTATATGGAGACTCTCCTGG
GCCTTAGTATTGAGGACATCAGTAAATGA
Protein sequenceShow/hide protein sequence
MVDRSGQSSDARPGSSNQERKGDMQPFESDDLIRDCMDTANDQLKTIAEWPNKAINWEDTMVLEFITYMETLLGLSIEDISK