CuGenDBv2

Gene ID	IVF0012516
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic
Genome location	chr03:3440227..3440528
RNA-Seq Expression	IVF0012516
Synteny	IVF0012516
Gene Ontology terms	GO:0042773 - ATP synthesis coupled electron transport (biological process) GO:0009507 - chloroplast (cellular component) GO:0009579 - thylakoid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016651 - oxidoreductase activity, acting on NAD(P)H (molecular function)
InterPro domains	IPR001133 - NADH-ubiquinone oxidoreductase chain 4L/K IPR039428 - NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like

Homology

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GenBank top hits

e value

%identity

Alignment

ADD31372.1 NADH-plastoquinone oxidoreductase subunit 4L protein [Bulnesia arborea]

5.93e-31

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFSIG+Y LITSRNM+R LM LEL+LNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKSTCINQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

ATV97614.1 NADH-plastoquinone oxidoreductase subunit 4L [Lecythis minor]

2.07e-31

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFSIG+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKSTCINQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

KAF1876950.1 hypothetical protein Lal_00033875 [Lupinus albus]

2.78e-31

76.74

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFFYTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFSIG+Y LITSRNM+R LM LELILNA+N NFVTF DFF  IAAAEA IG  I+S I  NRKST INQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFFYTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

QNR04318.1 NADH dehydrogenase subunit 4L [Aldama dentata]

5.93e-31

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFS+G+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKSTCINQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

QVD44246.1 NADH-plastoquinone oxidoreductase subunit 4L [Primula vilmoriniana]

2.01e-31

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFSIG+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+SLIY NRKS CINQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

TrEMBL top hits

e value

%identity

Alignment

A0A2H4NWA4 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

2.8e-23

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFSIG+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKSTCINQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

A0A4Y5PPW4 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

6.3e-23

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFSIG+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I++ IY NRKSTCINQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

A0A650DNZ2 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

6.3e-23

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFS+G+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKSTCINQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

A0A6A5N0N2 Uncharacterized protein

4.8e-23

76.74

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFFYTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFSIG+Y LITSRNM+R LM LELILNA+N NFVTF DFF  IAAAEA IG  I+S I  NRKST INQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFFYTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

A0A7H0TTG6 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

6.3e-23

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFS+G+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKSTCINQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

SwissProt top hits

e value

%identity

Alignment

A0A387 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

5.5e-24

66.67

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLN
        MLEHVL++SAYLFSIG+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKST INQSNLLN
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLN

Q0G9R0 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

4.2e-24

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFS+G+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKST INQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

Q1KXQ5 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

4.2e-24

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFS+G+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKST INQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

Q2QD39 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

1.1e-24

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVLIISAYLFSIG+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG  ILS IY NRKST INQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

Q332S5 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic

4.2e-24

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        MLEHVL++SAYLFS+G+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKST INQSNLLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

Arabidopsis top hits

e value

%identity

Alignment

ATCG01070.1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L

8.1e-23

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Query:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK
        +LEHVL++SAYLF IG+Y LITSRNM+R LM LELILNA+N NFVTF DFF                IAAAEA IG+ I+S IY NRKS  INQS LLNK
Subjt:  MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFF--------------YTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

Sequences

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CDS sequence

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ATGCTCGAACACGTACTTATTATAAGTGCTTATTTATTTTCTATCGGTGTCTATAGATTGATCACGAGCCGAAATATGATTAGGGTCCTTATGTATCTCGAGCTTATATT
GAATGCAATTAATACGAATTTCGTAACATTTTATGATTTTTTTTATACTATTGCAGCTGCTGAAGCAATTATTGGCATGACTATTCTTTCGTTAATTTATCATAACAGAA
AATCAACTTGTATCAATCAATCGAATTTGTTGAATAAGTAG

mRNA sequence

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Protein sequence

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MLEHVLIISAYLFSIGVYRLITSRNMIRVLMYLELILNAINTNFVTFYDFFYTIAAAEAIIGMTILSLIYHNRKSTCINQSNLLNK

IVF0012516 (gene) of Melon (IVF77) v1 genome