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IVF0012579 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012579
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr10:23943567..23943794
RNA-Seq ExpressionIVF0012579
SyntenyIVF0012579
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031645.1 hypothetical protein E6C27_scaffold139G004180 [Cucumis melo var. makuwa]4.98e-1259.68Show/hide
Query:  VDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIRSDRHML
        +DS I+ VGTSKTP+SKP E+ L PS+LL+EI   + T+ VLHPKEM  LK  Y RS R ML
Subjt:  VDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIRSDRHML

KAA0048242.1 hypothetical protein E6C27_scaffold63G001580 [Cucumis melo var. makuwa]1.47e-0768.42Show/hide
Query:  MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEIN
        M PH VDS I+EVGTSKTP+SKP+E+ L PS LL+EI+
Subjt:  MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEIN

KAA0050516.1 hypothetical protein E6C27_scaffold175G001600 [Cucumis melo var. makuwa]1.91e-0857.41Show/hide
Query:  PHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWE-----EKTLKVLHPKE
        PH VDS  +EVGTSKT ++KP E+ LHPS LL+EI        EKTL+ LHPK+
Subjt:  PHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWE-----EKTLKVLHPKE

KAA0065436.1 hypothetical protein E6C27_scaffold17G001150 [Cucumis melo var. makuwa]2.03e-34100Show/hide
Query:  MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIR
        MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIR
Subjt:  MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIR

TYJ95712.1 hypothetical protein E5676_scaffold282G00100 [Cucumis melo var. makuwa]4.91e-0951.72Show/hide
Query:  PHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEE----KTLKVLHPKEMSVLK
        PH V+S IK+V TSK  ++KP+E+FL  S LL+E++ ++    KTL+ +HPKEMS LK
Subjt:  PHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEE----KTLKVLHPKEMSVLK

TrEMBL top hitse value%identityAlignment
A0A5A7U8L3 PMD domain-containing protein4.6e-0657.41Show/hide
Query:  PHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEI-----NWEEKTLKVLHPKE
        PH VDS  +EVGTSKT ++KP E+ LHPS LL+EI        EKTL+ LHPK+
Subjt:  PHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEI-----NWEEKTLKVLHPKE

A0A5A7VGI3 Uncharacterized protein3.4e-25100Show/hide
Query:  MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIR
        MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIR
Subjt:  MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIR

A0A5D3B788 Uncharacterized protein4.6e-0651.72Show/hide
Query:  PHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEE----KTLKVLHPKEMSVLK
        PH V+S IK+V TSK  ++KP+E+FL  S LL+E++ ++    KTL+ +HPKEMS LK
Subjt:  PHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEE----KTLKVLHPKEMSVLK

A0A5D3BZ74 Uncharacterized protein7.7e-0959.38Show/hide
Query:  VDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIRSDRHMLLL
        +DS I+ VGTSKTP+SKP E+ L PS+LL+EI   + T+ VLHPKEM  LK  Y RS R ML L
Subjt:  VDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIRSDRHMLLL

A0A5D3C961 Uncharacterized protein3.0e-0561.36Show/hide
Query:  MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTL
        M PH VDS I+EVGTSKTP+SKP+E+ L PS LL+EI+  + T+
Subjt:  MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCTCATACAGTTGATTCGGTCATTAAGGAAGTTGGTACCTCGAAGACTCCCATTTCTAAACCAATTGAACGGTTCTTACATCCATCTACTCTTCTCAAGGAGAT
TAACTGGGAGGAAAAGACATTGAAAGTCCTCCATCCAAAGGAGATGTCTGTCCTAAAGCGCCTTTACATAAGGTCAGATCGACACATGCTTCTCTTAAGATTTCTCAATC
GACTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCTCATACAGTTGATTCGGTCATTAAGGAAGTTGGTACCTCGAAGACTCCCATTTCTAAACCAATTGAACGGTTCTTACATCCATCTACTCTTCTCAAGGAGAT
TAACTGGGAGGAAAAGACATTGAAAGTCCTCCATCCAAAGGAGATGTCTGTCCTAAAGCGCCTTTACATAAGGTCAGATCGACACATGCTTCTCTTAAGATTTCTCAATC
GACTTTAG
Protein sequenceShow/hide protein sequence
MEPHTVDSVIKEVGTSKTPISKPIERFLHPSTLLKEINWEEKTLKVLHPKEMSVLKRLYIRSDRHMLLLRFLNRL