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IVF0012592 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012592
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRING-type domain-containing protein
Genome locationchr06:18229763..18230199
RNA-Seq ExpressionIVF0012592
SyntenyIVF0012592
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577374.1 RING-H2 finger protein ATL8, partial [Cucurbita argyrosperma subsp. sororia]2.21e-3064.56Show/hide
Query:  VDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        VD  E NR IQ+AMEKLTKPS  YD E++NE+ S  S+C ICLE+      CRVFPNCKH+FHTHCI+ WL INQTCP+
Subjt:  VDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

KAG6600728.1 putative RING-H2 finger protein ATL19, partial [Cucurbita argyrosperma subsp. sororia]1.25e-2761.73Show/hide
Query:  VDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTS--SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        V+PEE N Q    MEKLT P   Y C+EN+   ++S  +EC ICLE  G +VSCRVFPNCKH+FHTHCII WL IN TCPI
Subjt:  VDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTS--SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

KAG7031368.1 RING-H2 finger protein ATL52, partial [Cucurbita argyrosperma subsp. argyrosperma]5.34e-2661.73Show/hide
Query:  VDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTS--SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        V+PEE N Q    MEKLT P   Y C+EN+   ++S  +EC ICLE  G +VSCRVFPNCKH+FHTHCII WL IN TCPI
Subjt:  VDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTS--SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

XP_011652743.1 uncharacterized protein LOC105435076 [Cucumis sativus]1.98e-4991.76Show/hide
Query:  VPTTMV-DPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        V TTMV DPEERNRQ+QMAMEKLTKPSAYY+CEEN+ESPST SECTICLEDLGE+VSCRVFPNCKHIFHTHCIINWLEINQTCPI
Subjt:  VPTTMV-DPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

XP_023545744.1 RING-H2 finger protein ATL52-like [Cucurbita pepo subsp. pepo]2.47e-2864.2Show/hide
Query:  VDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTS--SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        V+PEE N QI  AMEKLT P   Y C+EN+   + S  +EC ICLE  G +VSCRVFPNCKH+FHTHCII WL IN TCPI
Subjt:  VDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTS--SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

TrEMBL top hitse value%identityAlignment
A0A067F8J1 RING-type domain-containing protein (Fragment)1.7e-0944.74Show/hide
Query:  EERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        EER RQ +  + K+T    Y    +   + S+SS C ICLE   +  +CR+F  C HIFH +CI  WLEIN TCP+
Subjt:  EERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

A0A067FG84 RING-type domain-containing protein2.2e-0946.67Show/hide
Query:  ERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        ER  Q Q A+EKL     Y     + E  S   +C+ICL+D  +   CRVFP CKHIFH  CI +WL    TCPI
Subjt:  ERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

A0A0A0L7Y8 RING-type domain-containing protein3.4e-3981.63Show/hide
Query:  MVDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPIYTYIH--IINVGYKFMLN
        ++ P ERNRQ+QMAMEKLTKPSAYY+CEEN+ESPST SECTICLEDLGE+VSCRVFPNCKHIFHTHCIINWLEINQTCPI   I+    N+GYKFMLN
Subjt:  MVDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPIYTYIH--IINVGYKFMLN

V4URL5 RING-type domain-containing protein7.5e-1044.74Show/hide
Query:  EERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        EER RQ +  + K+T+   Y    +   + S+SS C ICLE   +  +CR+F  C HIFH +CI  WLEIN TCP+
Subjt:  EERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

V4WEW6 RING-type domain-containing protein2.2e-0946.67Show/hide
Query:  ERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        ER  Q Q A+EKL     Y     + E  S   +C+ICL+D  +   CRVFP CKHIFH  CI +WL    TCPI
Subjt:  ERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

SwissProt top hitse value%identityAlignment
Q8LF65 RING-H2 finger protein ATL172.6e-0747.62Show/hide
Query:  ECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        EC++CL +  +  S RV PNCKH FH HCI  W   + +CP+
Subjt:  ECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

Q8RX29 RING-H2 finger protein ATL701.5e-0746.94Show/hide
Query:  ESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        + P+T+S C ICL D   K   R  P+C H+FH  CI  WL +N TCP+
Subjt:  ESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

Q9C919 Putative RING-H2 finger protein ATL191.5e-0748.08Show/hide
Query:  EENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCP
        EE+ E    S EC ICL        CRVFP C+HI+H  CI  WL+ + TCP
Subjt:  EENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCP

Q9LSW9 RING-H2 finger protein ATL162.0e-0727.96Show/hide
Query:  PTTMVDPEERNRQIQMAM----------EKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        P  +  PE R+R +  ++          ++  +    +  E   E    S EC++CL +  ++   R+ PNC H+FH  CI  WL+ N  CP+
Subjt:  PTTMVDPEERNRQIQMAM----------EKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

Q9SLC4 RING-H2 finger protein ATL405.2e-0848.84Show/hide
Query:  SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        +EC +CL  L EK + R+ PNCKH+FH  C+  WL    TCP+
Subjt:  SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

Arabidopsis top hitse value%identityAlignment
AT1G53010.1 RING/U-box superfamily protein1.1e-0848.08Show/hide
Query:  EENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCP
        EE+ E    S EC ICL        CRVFP C+HI+H  CI  WL+ + TCP
Subjt:  EENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCP

AT2G35910.1 RING/U-box superfamily protein1.1e-0846.94Show/hide
Query:  ESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        + P+T+S C ICL D   K   R  P+C H+FH  CI  WL +N TCP+
Subjt:  ESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

AT2G42350.1 RING/U-box superfamily protein3.7e-0948.84Show/hide
Query:  SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        +EC +CL  L EK + R+ PNCKH+FH  C+  WL    TCP+
Subjt:  SECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

AT2G42360.1 RING/U-box superfamily protein1.8e-0845.65Show/hide
Query:  STSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        ++++EC +CL  L E+   R  PNCKHIFH  C+  WL    TCP+
Subjt:  STSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI

AT5G43420.1 RING/U-box superfamily protein1.4e-0827.96Show/hide
Query:  PTTMVDPEERNRQIQMAM----------EKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI
        P  +  PE R+R +  ++          ++  +    +  E   E    S EC++CL +  ++   R+ PNC H+FH  CI  WL+ N  CP+
Subjt:  PTTMVDPEERNRQIQMAM----------EKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCTGCCACCGGGGGTACCAACGACAATGGTGGATCCTGAGGAGCGGAATCGTCAGATTCAAATGGCGATGGAGAAATTGACGAAACCATCGGCATATTATGATTG
TGAAGAGAATAATGAATCTCCATCGACATCGAGCGAATGCACAATATGTTTAGAGGACCTTGGAGAAAAAGTTTCATGTCGAGTTTTTCCTAATTGCAAGCATATATTCC
ATACACATTGCATAATCAATTGGTTAGAGATTAATCAAACTTGTCCGATATACACATATATTCATATAATTAACGTAGGTTACAAATTCATGTTGAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTGCTGCCACCGGGGGTACCAACGACAATGGTGGATCCTGAGGAGCGGAATCGTCAGATTCAAATGGCGATGGAGAAATTGACGAAACCATCGGCATATTATGATTG
TGAAGAGAATAATGAATCTCCATCGACATCGAGCGAATGCACAATATGTTTAGAGGACCTTGGAGAAAAAGTTTCATGTCGAGTTTTTCCTAATTGCAAGCATATATTCC
ATACACATTGCATAATCAATTGGTTAGAGATTAATCAAACTTGTCCGATATACACATATATTCATATAATTAACGTAGGTTACAAATTCATGTTGAACTAA
Protein sequenceShow/hide protein sequence
MLLPPGVPTTMVDPEERNRQIQMAMEKLTKPSAYYDCEENNESPSTSSECTICLEDLGEKVSCRVFPNCKHIFHTHCIINWLEINQTCPIYTYIHIINVGYKFMLN