; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0012595 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012595
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Descriptionpentatricopeptide repeat-containing protein At4g18975, chloroplastic
Genome locationchr01:2027743..2042600
RNA-Seq ExpressionIVF0012595
SyntenyIVF0012595
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136857.2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucumis sativus]2.35e-19691.39Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        MLIRR +RAAAWATPLLRHPTVG+TMELGVSRLQVG S YCT IQDQM +QLADKDRK+KDV++SKALGHISEQNIGDIRKH+IG+N+SRKDKI FLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LLDLRDSKEAVYGALDAWVAWEQDFPIA LKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHR EEAHKFWVMKIGSDLHSVPWQ+
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLVK
        CRSM+AIYYRNK LEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEK+  MKKYKR+SFEK KRKRKSTKG+EDNSNLVK
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLVK

Query:  SE
        SE
Subjt:  SE

XP_008455250.1 PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucumis melo]8.82e-217100Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLVK
        CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLVK
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLVK

Query:  SE
        SE
Subjt:  SE

XP_022967610.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucurbita maxima]3.16e-17282.39Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        MLIRRF+RAA WATPLLR  TVG+ MELGV++LQ+G S YCTM+Q+QM K+ ADKD  +KDV+NSK L   SE+NIGDIRKH+IGENVSRKDKI+FLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLKH LA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV
        CRSMI+IYYRNKMLEDLVKLFKDLEAFGRKPP+KSIVQRVADACEMLGL+EEKERVLVKY YLF DEK+ S+KKYK         KRKSTKG++DNS+L+
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV

Query:  K
        K
Subjt:  K

XP_023511579.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]1.82e-17182.06Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        MLIRRF+RAA WATPLLR  TVG+ MELGV++LQ+G S YCTM+Q+QM K+ ADKD  +KDV+NSK L   SE+NIGDIRKH+IGENVSRKDKI+FLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLKH L  LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV
        CRSMI+IYYRNKMLEDLVKLFKDLEAFGRKPP+KSIVQRVADACEMLGL+EEKERVLVKY YLF DEK+ S+KKYK         KRKSTKG++DNS+L+
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV

Query:  K
        K
Subjt:  K

XP_038887984.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Benincasa hispida]1.08e-18386.8Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        ML+RRF+RA AWATPLLR  TVG+ MELGVSRLQVG   YCTMIQDQM KQLA KD KNKD +NSKALG  SEQNIGD+RKH+IG+NV RKDKI+FLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LLDLRDSKEAVYGALDAWVAWEQDFPI SLKHVL  LEKEQQWHR+VQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV
        CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPP+KSIVQRVADACE+LGLLEEKERVL+KYKYLF DEK+ S+KKYKRVSFEK K KRKSTK +EDNSNL+
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV

Query:  KSE
        K++
Subjt:  KSE

TrEMBL top hitse value%identityAlignment
A0A1S3C174 pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.0e-168100Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLVK
        CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLVK
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLVK

Query:  SE
        SE
Subjt:  SE

A0A6J1HFH8 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X23.9e-12879.73Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        MLIRRF+RAA WATPLLR  TVG+ MELGV++LQ+G S YCTM+Q+QM K+  DKD  +K           SE+NIGDIRKH+IGENVSRKDKI FLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLKH LA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV
        CRSMI+IYYRNKMLEDLVKLFK+LEAFGRKPP+KSIVQRVADACEMLGL+EEKERVLVKY YLF DEK+ S+KKY        K KRKSTKG++DNS+L+
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV

Query:  K
        K
Subjt:  K

A0A6J1HGC4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X12.4e-13381.73Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        MLIRRF+RAA WATPLLR  TVG+ MELGV++LQ+G S YCTM+Q+QM K+  DKD  +KDV+NSK L   SE+NIGDIRKH+IGENVSRKDKI FLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLKH LA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV
        CRSMI+IYYRNKMLEDLVKLFK+LEAFGRKPP+KSIVQRVADACEMLGL+EEKERVLVKY YLF DEK+ S+KKY        K KRKSTKG++DNS+L+
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV

Query:  K
        K
Subjt:  K

A0A6J1HSN2 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X22.7e-12980.4Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        MLIRRF+RAA WATPLLR  TVG+ MELGV++LQ+G S YCTM+Q+QM K+ ADKD  +K           SE+NIGDIRKH+IGENVSRKDKI+FLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLKH LA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV
        CRSMI+IYYRNKMLEDLVKLFKDLEAFGRKPP+KSIVQRVADACEMLGL+EEKERVLVKY YLF DEK+ S+KKY        K KRKSTKG++DNS+L+
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV

Query:  K
        K
Subjt:  K

A0A6J1HUZ4 pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X11.6e-13482.39Show/hide
Query:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT
        MLIRRF+RAA WATPLLR  TVG+ MELGV++LQ+G S YCTM+Q+QM K+ ADKD  +KDV+NSK L   SE+NIGDIRKH+IGENVSRKDKI+FLVNT
Subjt:  MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNT

Query:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
        L+DLRDSKEAVYGALDAWVAWEQDFPIASLKH LA LEKE QWHR+VQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL
Subjt:  LLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQL

Query:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV
        CRSMI+IYYRNKMLEDLVKLFKDLEAFGRKPP+KSIVQRVADACEMLGL+EEKERVLVKY YLF DEK+ S+KKY        K KRKSTKG++DNS+L+
Subjt:  CRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLF-DEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLV

Query:  K
        K
Subjt:  K

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic7.8e-3337.9Show/hide
Query:  GHISEQNIGDIRK--------HKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGT
        G+++  N  +I+K         K  ++     K   LV  L  L + KEAVYGAL+ WVAWE +FPI +    L  L K  QWHR++Q+ KWMLSKGQG 
Subjt:  GHISEQNIGDIRK--------HKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGT

Query:  TMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKE----RV
        TM  Y  L+ A DMD RA+EA   W M + +   S+P +L   MIA+Y  + + + ++++F D+E   +  PD+   +RVA A   L   E ++    R 
Subjt:  TMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKE----RV

Query:  LVKYKYL-FDEKQESMKKY
        L +YKY+ F+ ++  +K+Y
Subjt:  LVKYKYL-FDEKQESMKKY

Q8LG95 Pentatricopeptide repeat-containing protein At4g211902.3e-2937.57Show/hide
Query:  RKHKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAE
        R  K  + +    K + ++  +  L + KE VYGALD+++AWE +FP+  +K  L  LE E++W +I+QV KWMLSKGQG TM  Y  L+ AL  D+R +
Subjt:  RKHKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAE

Query:  EAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKY
        EA + W       L   P +    MI+IYY+  M + L ++F D+E  G K P+ +IV  V      L + ++ E+++ KY
Subjt:  EAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKY

Arabidopsis top hitse value%identityAlignment
AT1G04590.1 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G21190.1)5.6e-7958.24Show/hide
Query:  IQDQMYKQLADKDRKNKDVDNSKALGHISEQ----NIGDIRKHKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEK
        +Q   Y+ +AD     K +  ++     S+     N  + RKH+IGEN+ +KDKI FLVNTLLD+ D+KEAVYGALDAWVAWE++FPIASLK V+A+LEK
Subjt:  IQDQMYKQLADKDRKNKDVDNSKALGHISEQ----NIGDIRKHKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEK

Query:  EQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQR
        E QWHR+VQVIKW+LSKGQG TM  YGQLIRALDMD RAEEAH  W  K+G+DLHSVPWQLC  M+ IY+RN ML++LVKLFKDLE++ RKPPDK IVQ 
Subjt:  EQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQR

Query:  VADACEMLGLLEEKERVLVKYKYLF------DEKQESMKKYKRVSFEKPKRKRKSTKGSED
        VADA E+LG+L+EKERV+ KY +L       D+   S +K K+     P+    +T+G+ D
Subjt:  VADACEMLGLLEEKERVLVKYKYLF------DEKQESMKKYKRVSFEKPKRKRKSTKGSED

AT1G04590.2 BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4)2.4e-7757.58Show/hide
Query:  IQDQMYKQLADKDRKNKDVDNSKALGHISEQ----NIGDIRKHKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEK
        +Q   Y+ +AD     K +  ++     S+     N  + RKH+IGEN+ +KDKI FLVNTLLD+ D+KEAVYGALDAWVAWE++FPIASLK V+A+LEK
Subjt:  IQDQMYKQLADKDRKNKDVDNSKALGHISEQ----NIGDIRKHKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEK

Query:  EQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLV---KLFKDLEAFGRKPPDKSI
        E QWHR+VQVIKW+LSKGQG TM  YGQLIRALDMD RAEEAH  W  K+G+DLHSVPWQLC  M+ IY+RN ML++LV   KLFKDLE++ RKPPDK I
Subjt:  EQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLV---KLFKDLEAFGRKPPDKSI

Query:  VQRVADACEMLGLLEEKERVLVKYKYLF------DEKQESMKKYKRVSFEKPKRKRKSTKGSED
        VQ VADA E+LG+L+EKERV+ KY +L       D+   S +K K+     P+    +T+G+ D
Subjt:  VQRVADACEMLGLLEEKERVLVKYKYLF------DEKQESMKKYKRVSFEKPKRKRKSTKGSED

AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein5.5e-3437.9Show/hide
Query:  GHISEQNIGDIRK--------HKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGT
        G+++  N  +I+K         K  ++     K   LV  L  L + KEAVYGAL+ WVAWE +FPI +    L  L K  QWHR++Q+ KWMLSKGQG 
Subjt:  GHISEQNIGDIRK--------HKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGT

Query:  TMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKE----RV
        TM  Y  L+ A DMD RA+EA   W M + +   S+P +L   MIA+Y  + + + ++++F D+E   +  PD+   +RVA A   L   E ++    R 
Subjt:  TMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKE----RV

Query:  LVKYKYL-FDEKQESMKKY
        L +YKY+ F+ ++  +K+Y
Subjt:  LVKYKYL-FDEKQESMKKY

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein5.5e-3437.9Show/hide
Query:  GHISEQNIGDIRK--------HKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGT
        G+++  N  +I+K         K  ++     K   LV  L  L + KEAVYGAL+ WVAWE +FPI +    L  L K  QWHR++Q+ KWMLSKGQG 
Subjt:  GHISEQNIGDIRK--------HKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGT

Query:  TMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKE----RV
        TM  Y  L+ A DMD RA+EA   W M + +   S+P +L   MIA+Y  + + + ++++F D+E   +  PD+   +RVA A   L   E ++    R 
Subjt:  TMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKE----RV

Query:  LVKYKYL-FDEKQESMKKY
        L +YKY+ F+ ++  +K+Y
Subjt:  LVKYKYL-FDEKQESMKKY

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein5.5e-3437.9Show/hide
Query:  GHISEQNIGDIRK--------HKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGT
        G+++  N  +I+K         K  ++     K   LV  L  L + KEAVYGAL+ WVAWE +FPI +    L  L K  QWHR++Q+ KWMLSKGQG 
Subjt:  GHISEQNIGDIRK--------HKIGENVSRKDKISFLVNTLLDLRDSKEAVYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGT

Query:  TMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKE----RV
        TM  Y  L+ A DMD RA+EA   W M + +   S+P +L   MIA+Y  + + + ++++F D+E   +  PD+   +RVA A   L   E ++    R 
Subjt:  TMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKLFKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKE----RV

Query:  LVKYKYL-FDEKQESMKKY
        L +YKY+ F+ ++  +K+Y
Subjt:  LVKYKYL-FDEKQESMKKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCATCCGGAGGTTTTATAGAGCCGCGGCATGGGCGACACCTCTGTTGCGACACCCAACCGTAGGGAAAACCATGGAGCTTGGAGTCAGCAGGCTGCAAGTTGGGTG
CTCTTGGTACTGCACAATGATACAAGATCAAATGTATAAACAGCTTGCTGATAAAGATAGAAAAAATAAGGATGTTGACAATAGTAAAGCTTTGGGGCACATTTCAGAGC
AAAATATTGGAGACATTAGAAAGCACAAAATTGGGGAAAATGTTTCACGGAAAGACAAAATTAGTTTTCTTGTAAATACGCTGCTCGATCTGAGAGATAGTAAGGAGGCT
GTTTATGGTGCTCTTGATGCCTGGGTTGCATGGGAGCAAGACTTTCCAATTGCATCCCTTAAGCATGTATTGGCTGCCCTTGAGAAGGAACAACAGTGGCATAGAATTGT
ACAGGTAATCAAATGGATGCTAAGCAAGGGCCAGGGAACCACAATGAATGTCTATGGGCAGTTAATTCGGGCTTTAGACATGGACCATCGAGCGGAAGAAGCACACAAAT
TTTGGGTTATGAAGATTGGTTCGGATCTTCATTCAGTTCCTTGGCAATTGTGCAGAAGCATGATAGCAATATACTACCGAAATAAAATGCTAGAAGACCTTGTAAAGCTT
TTTAAGGATCTCGAAGCCTTTGGACGTAAACCCCCAGACAAATCAATAGTTCAGAGGGTAGCAGATGCTTGTGAGATGCTAGGCTTGCTTGAAGAGAAAGAGAGGGTACT
CGTAAAGTACAAATACCTTTTTGATGAGAAGCAAGAGTCCATGAAGAAATATAAGAGGGTTTCGTTTGAAAAACCAAAGAGAAAACGAAAATCAACAAAGGGCAGTGAAG
ACAATAGCAACCTTGTGAAGTCTGAATGA
mRNA sequenceShow/hide mRNA sequence
GTATTACCCAAATACTACTCGGGACAGTGGCGCCCTTCACTCCACCATGCTCATCCGGAGGTTTTATAGAGCCGCGGCATGGGCGACACCTCTGTTGCGACACCCAACCG
TAGGGAAAACCATGGAGCTTGGAGTCAGCAGGCTGCAAGTTGGGTGCTCTTGGTACTGCACAATGATACAAGATCAAATGTATAAACAGCTTGCTGATAAAGATAGAAAA
AATAAGGATGTTGACAATAGTAAAGCTTTGGGGCACATTTCAGAGCAAAATATTGGAGACATTAGAAAGCACAAAATTGGGGAAAATGTTTCACGGAAAGACAAAATTAG
TTTTCTTGTAAATACGCTGCTCGATCTGAGAGATAGTAAGGAGGCTGTTTATGGTGCTCTTGATGCCTGGGTTGCATGGGAGCAAGACTTTCCAATTGCATCCCTTAAGC
ATGTATTGGCTGCCCTTGAGAAGGAACAACAGTGGCATAGAATTGTACAGGTAATCAAATGGATGCTAAGCAAGGGCCAGGGAACCACAATGAATGTCTATGGGCAGTTA
ATTCGGGCTTTAGACATGGACCATCGAGCGGAAGAAGCACACAAATTTTGGGTTATGAAGATTGGTTCGGATCTTCATTCAGTTCCTTGGCAATTGTGCAGAAGCATGAT
AGCAATATACTACCGAAATAAAATGCTAGAAGACCTTGTAAAGCTTTTTAAGGATCTCGAAGCCTTTGGACGTAAACCCCCAGACAAATCAATAGTTCAGAGGGTAGCAG
ATGCTTGTGAGATGCTAGGCTTGCTTGAAGAGAAAGAGAGGGTACTCGTAAAGTACAAATACCTTTTTGATGAGAAGCAAGAGTCCATGAAGAAATATAAGAGGGTTTCG
TTTGAAAAACCAAAGAGAAAACGAAAATCAACAAAGGGCAGTGAAGACAATAGCAACCTTGTGAAGTCTGAATGAATGAAAGAAACAGGTAAAAATATGAAAGAAATTAT
GTGTTAATTAACTTATTCATTTGTCTCAGCAACCCTGATTATAATGGTGACGTCTTACGGGTATCAATATTTTGCTTCGGCTTTTGTAAATAATTGGTTTTTATTGTTAG
AATTTTAGTTCTCGAACTTGTAGCACTGACATGTATTTAGCCCATAAGCAATTACCCTTTTGAAATCCATATTAATTCGAGAGTATTTGTAGTGAATGATAAAATTAGCT
AATTCTGGGCATAGCAAGTTGGTTTTCTTTTTCATCTAGATTTTCTTCAATAGCTTAAGCCGATATTAATG
Protein sequenceShow/hide protein sequence
MLIRRFYRAAAWATPLLRHPTVGKTMELGVSRLQVGCSWYCTMIQDQMYKQLADKDRKNKDVDNSKALGHISEQNIGDIRKHKIGENVSRKDKISFLVNTLLDLRDSKEA
VYGALDAWVAWEQDFPIASLKHVLAALEKEQQWHRIVQVIKWMLSKGQGTTMNVYGQLIRALDMDHRAEEAHKFWVMKIGSDLHSVPWQLCRSMIAIYYRNKMLEDLVKL
FKDLEAFGRKPPDKSIVQRVADACEMLGLLEEKERVLVKYKYLFDEKQESMKKYKRVSFEKPKRKRKSTKGSEDNSNLVKSE