CuGenDBv2

Gene ID	IVF0012614
Organism	Cucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Coiled-coil domain-containing protein 86
Genome location	chr09:16008243..16009119
RNA-Seq Expression	IVF0012614
Synteny	IVF0012614
Gene Ontology terms	GO:0005730 - nucleolus (cellular component)
InterPro domains	IPR005579 - Cgr1-like IPR026570 - Coiled-coil domain-containing protein 86

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004143761.1 protein PXR1 [Cucumis sativus]

8.35e-119

98.43

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADT MEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVI GKVSGRKWKQ RKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

XP_008465532.1 PREDICTED: protein PXR1 [Cucumis melo]

3.04e-121

100

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Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

XP_022939634.1 protein PXR1 [Cucurbita moschata]

8.54e-107

90.58

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAE SL I  SENAD +M++D+SLPP   KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHRTSAM V
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAA++ERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

XP_022992739.1 protein PXR1 [Cucurbita maxima]

1.21e-106

90.58

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAE SL I  SENAD +M++D+SLPP   KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHRTSAM V
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAA++ERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

XP_038874831.1 protein PXR1 [Benincasa hispida]

2.47e-113

95.81

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSL ITESENADT+MEIDDSLPPP +KRSAIPSSENPDKPT+ NPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQK IKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNG5 Coiled-coil domain-containing protein 86

9.1e-91

98.43

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADT MEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVI GKVSGRKWKQ RKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

A0A1S3CP36 Coiled-coil domain-containing protein 86

1.3e-92

100

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Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

A0A5D3BKZ5 Coiled-coil domain-containing protein 86

1.3e-92

100

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

A0A6J1FHS9 Coiled-coil domain-containing protein 86

1.3e-81

90.58

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAE SL I  SENAD +M++D+SL  PP KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHRTSAM V
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAA++ERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

A0A6J1JYC3 Coiled-coil domain-containing protein 86

1.7e-81

90.58

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAE SL I  SENAD +M++D+SL  PP KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHRTSAM V
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAA++ERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G31410.1 unknown protein

3.7e-52

63.73

Show/hide

Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKP---TYGNPTYDGVIAGKVSGRKWKQPRKHRTSA
        MACT+DFR LDEGFGGKTYKRKRE  E++    E+   + +M+ID +  PP AKRSA+ SSENPDKP       PTYDGVIAGKVSGR WKQPR HR+S 
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKP---TYGNPTYDGVIAGKVSGRKWKQPRKHRTSA

Query:  MQVSRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPEDYI
          V  +    EE +RQ+ IK A+KER  ELKE+IR NKVEKRKK+EEREK+KKEN+LR+GTKLQKITNPKTLKKI+ S KQ+K LK +P++ +
Subjt:  MQVSRKGTTFEERERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPEDYI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGTGCACAATCGACTTCCGCCGCCTGGATGAGGGTTTTGGTGGAAAAACGTATAAGAGAAAGCGTGAAGAAGCTGAGAAAAGCCTCATCATCACTGAATCCGAAAA
TGCCGACACCGCAATGGAGATCGACGACTCACTTCCACCACCACCTGCCAAGCGATCCGCTATTCCTTCCTCGGAAAATCCTGATAAACCCACTTACGGAAACCCCACAT
ATGACGGCGTGATTGCCGGAAAAGTCTCCGGACGGAAGTGGAAACAGCCGCGGAAGCACAGGACGTCCGCTATGCAGGTGAGCCGTAAAGGCACCACGTTCGAGGAGAGG
GAGAGGCAGAAGATGATTAAGGCGGCGTTTAAGGAACGGAAGGAGGAGTTGAAGGAGCAGATTAGGTTAAATAAGGTGGAGAAGAGAAAGAAGAGGGAGGAGAGAGAGAA
GAAGAAGAAGGAAAACATTTTGAGATCTGGAACTAAGCTACAAAAGATTACAAATCCCAAAACACTGAAGAAGATTGCAAAGTCTAAGCAGAAGAAGCTCCTCAAGGTTG
TTCCTGAGGATTACATCAAAAAATAG

mRNA sequence

Show/hide mRNA sequence

CCTTTTCACTTTCAGCAGCTTAAAGCTCTGAAACCCTAATTCCCAAATCTCTTCCATGGCGTGCACAATCGACTTCCGCCGCCTGGATGAGGGTTTTGGTGGAAAAACGT
ATAAGAGAAAGCGTGAAGAAGCTGAGAAAAGCCTCATCATCACTGAATCCGAAAATGCCGACACCGCAATGGAGATCGACGACTCACTTCCACCACCACCTGCCAAGCGA
TCCGCTATTCCTTCCTCGGAAAATCCTGATAAACCCACTTACGGAAACCCCACATATGACGGCGTGATTGCCGGAAAAGTCTCCGGACGGAAGTGGAAACAGCCGCGGAA
GCACAGGACGTCCGCTATGCAGGTGAGCCGTAAAGGCACCACGTTCGAGGAGAGGGAGAGGCAGAAGATGATTAAGGCGGCGTTTAAGGAACGGAAGGAGGAGTTGAAGG
AGCAGATTAGGTTAAATAAGGTGGAGAAGAGAAAGAAGAGGGAGGAGAGAGAGAAGAAGAAGAAGGAAAACATTTTGAGATCTGGAACTAAGCTACAAAAGATTACAAAT
CCCAAAACACTGAAGAAGATTGCAAAGTCTAAGCAGAAGAAGCTCCTCAAGGTTGTTCCTGAGGATTACATCAAAAAATAGGACCGTCGCTTCTGTTCTAAGGTTTTTAC
ACCACCTTTTGAGTAATATAGAGAGATTTATCTGTTTTCTTTTGGAGTTTTGGCCGAATTTTCTGTATCATTAGTTCTAAACGCATAAAAATGTTGTGGAAACCAAAGCA
TATAGCTGCATTTCTTGATGTTTATATTTCTAACAATATTAGAAATTTTGATTAATCATCTTATTTGGATCACATTTAGAACTAATATCATTTATAAACTACAGCCA

Protein sequence

Show/hide protein sequence

MACTIDFRRLDEGFGGKTYKRKREEAEKSLIITESENADTAMEIDDSLPPPPAKRSAIPSSENPDKPTYGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVSRKGTTFEER
ERQKMIKAAFKERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK

IVF0012614 (gene) of Melon (IVF77) v1 genome