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IVF0012633 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012633
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionSWIB domain-containing protein
Genome locationchr01:716856..718909
RNA-Seq ExpressionIVF0012633
SyntenyIVF0012633
Gene Ontology termsGO:0005634 - nucleus (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR019835 - SWIB domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136946.1 uncharacterized protein LOC101217337 [Cucumis sativus]9.70e-8593.01Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAFLSTFIAVKPSLLVVKPSPTTSSS+   LKHLNQLPLPDLRFPRTVTFA AS QATAP REPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        ENNLQKPS+KKVI CDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_008455019.1 PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis melo]3.77e-94100Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_022952608.1 uncharacterized protein LOC111455244 [Cucurbita moschata]2.93e-6573.43Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAF+STF++ +PSLLV +     +S+  SS+KH  QLPLP+LRF RT+TFA ASNQ TA  R+PRGI KPR+ISPE+QALVGAPEISRT+ALKVIW +IK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        E+NLQKPSDKK+I+CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_023553864.1 uncharacterized protein LOC111811315 [Cucurbita pepo subsp. pepo]2.93e-6573.43Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAF+STF++ +PSLLV +     +S+  SS+KH  QLPLP+LRF RT+TFA ASNQ TA  R+PRGI KPR+ISPE+QALVGAPEISRTQALKVIW +IK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        E+NLQKP+DKK+I+CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

XP_038888173.1 uncharacterized protein LOC120078055 isoform X1 [Benincasa hispida]1.94e-7079.72Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAFLSTFI+ +PSLLVVK     +S++++S+K   QLPLP+LRF RTVTFA ASNQATA  R+PRGI KPR+ISPE+QALVGAPEISRTQALKVIWA+IK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        E+NLQKPSDKKVI+CDEKLKNIFGGKDEVGFLEIAGLISPHFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

TrEMBL top hitse value%identityAlignment
A0A0A0K2G6 Brg-1 associated factor1.9e-6493.01Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAFLSTFIAVKPSLLVVKPSPTT   SSS+LKHLNQLPLPDLRFPRTVTFA AS QATAP REPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        ENNLQKPS+KKVI CDEKLK IFGGKDEVGFLEIAGLISPHFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A1S3C0N2 SWI/SNF complex component SNF12 homolog1.6e-71100Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A6J1GL33 uncharacterized protein LOC1114552441.7e-4973.43Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAF+STF++ +PSLLV +     +S+  SS+KH  QLPLP+LRF RT+TFA ASNQ TA  R+PRGI KPR+ISPE+QALVGAPEISRT+ALKVIW +IK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        E+NLQKPSDKK+I+CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A6J1IAA1 uncharacterized protein LOC1114710825.0e-4974.13Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAF+STF++ + SLL+ +     +S+  SS+KH  QLPLP+LRF RT+TFA ASNQATA  R+PRGI KPR+ISPE+QALVGAPEISRTQALKVIWA+IK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        E+NLQKPSDKK+I+CDEKLK IFGGKDEVGFLEIAGLIS HFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

A0A6J1JNZ3 uncharacterized protein LOC1114861978.5e-4974.13Show/hide
Query:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK
        MAF+STFI+ + SLL V+     +S++SSS+KH  Q P  +L F RTVTFA  SNQATA +R+PRGI KP++ISPE+QALVG PEISRTQALKVIWA+IK
Subjt:  MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIK

Query:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        E+NLQKPSDKKVI+CDEKLKNIFGGKDEVGFLEIAGLISPHFL
Subjt:  ENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

SwissProt top hitse value%identityAlignment
O74503 Upstream activation factor subunit spp271.5e-1047.37Show/hide
Query:  ITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIF
        + KP K+SP+L   +G  ++SR Q +K +W YIK ++LQ P+DK+ I+CD+KLK++F
Subjt:  ITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIF

Q05024 Protein TRI15.7e-1051.85Show/hide
Query:  ISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFGGK
        +S  LQ  +G+ E+ RTQ +K+IW YIKE++LQ P D++ I+CDEK++ IFG K
Subjt:  ISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFGGK

Q08747 Upstream activation factor subunit UAF301.8e-0847.37Show/hide
Query:  TKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFG
        T+   +S  L +L+G  E++RT+ ++ +WAYIK +NLQ P++KK I+CDEKL+ I G
Subjt:  TKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFG

Arabidopsis top hitse value%identityAlignment
AT1G31760.1 SWIB/MDM2 domain superfamily protein2.4e-1947.42Show/hide
Query:  RTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHF
        RT+    A+ +A     E +GI K R +S +L +  G  E++R  ALK +W Y+K +NLQ P++KK I CD+KLK IF GKD+VG  EI  L+SPHF
Subjt:  RTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHF

AT2G14880.1 SWIB/MDM2 domain superfamily protein6.0e-3154.29Show/hide
Query:  STFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAP-RREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN
        STF+ +K +      +P+T  SS     H    P   LR  R VT A  S++ TA  +R PRGI KPR +SPE+Q +V  PEI+RTQALK IWAYIKE++
Subjt:  STFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAP-RREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENN

Query:  LQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        LQ P +K+ I+CDEKLK IF G+D VGFLEIA LI PHFL
Subjt:  LQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

AT2G35605.1 SWIB/MDM2 domain superfamily protein3.1e-1952.22Show/hide
Query:  ASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHF
        AS+      R+  GI K   +S  L   +G  E+SRT A+K IW YIK NNLQ P +K+ I+CDE+LK IF GKD VGFLEI+ L+S HF
Subjt:  ASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHF

AT3G03590.1 SWIB/MDM2 domain superfamily protein1.4e-1955.29Show/hide
Query:  RREPR--GITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        ++ PR  GI K   +SP L   +G  E SRT A+K IW YIK ++LQ P+DK+ I CDE LK IF GKD+VGFLEI+ L+SPHF+
Subjt:  RREPR--GITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDKKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL

AT4G34290.1 SWIB/MDM2 domain superfamily protein8.7e-3054.48Show/hide
Query:  SLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQ---ATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSD
        + L V  +P  SS  S S   L+     +LR  R VT A A++     T   REPRGI KPR +S  +Q +VG PEI RTQALK IWAYIKE++LQ P +
Subjt:  SLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQ---ATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSD

Query:  KKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL
        K+ I+CDEKLK IF GK+ VGFLEIA LI PHFL
Subjt:  KKVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCCTCTCCACCTTCATCGCCGTCAAACCGTCGCTCCTCGTCGTCAAACCCTCCCCCACCACCTCCTCCTCCTCCTCCTCCTCCCTCAAGCATCTCAATCAACT
CCCTCTCCCTGATTTGCGCTTCCCCCGCACTGTTACCTTCGCTTTCGCTTCCAACCAGGCCACTGCCCCCCGCCGGGAGCCCCGTGGCATCACGAAGCCCAGGAAGATTT
CACCGGAGTTGCAAGCACTTGTCGGCGCTCCTGAGATTTCCCGCACCCAAGCTCTTAAGGTCATTTGGGCTTACATTAAAGAAAATAATCTTCAGAAACCAAGCGACAAG
AAAGTCATAGTTTGCGATGAGAAACTGAAGAACATATTTGGAGGGAAAGATGAGGTTGGATTTCTGGAGATCGCAGGTTTAATAAGTCCACACTTTCTATAA
mRNA sequenceShow/hide mRNA sequence
GCGCGCGTTCCGAAATTCGAGCTTCTCGAGTTATCGCTCTTACCGCTTCACCTTCTTCGCTTTATCCATTTTTTGAGAACAACCTTTCGTCACTCACTTACTTCCGGCCA
TGGCTTTCCTCTCCACCTTCATCGCCGTCAAACCGTCGCTCCTCGTCGTCAAACCCTCCCCCACCACCTCCTCCTCCTCCTCCTCCTCCCTCAAGCATCTCAATCAACTC
CCTCTCCCTGATTTGCGCTTCCCCCGCACTGTTACCTTCGCTTTCGCTTCCAACCAGGCCACTGCCCCCCGCCGGGAGCCCCGTGGCATCACGAAGCCCAGGAAGATTTC
ACCGGAGTTGCAAGCACTTGTCGGCGCTCCTGAGATTTCCCGCACCCAAGCTCTTAAGGTCATTTGGGCTTACATTAAAGAAAATAATCTTCAGAAACCAAGCGACAAGA
AAGTCATAGTTTGCGATGAGAAACTGAAGAACATATTTGGAGGGAAAGATGAGGTTGGATTTCTGGAGATCGCAGGTTTAATAAGTCCACACTTTCTATAATTATTCGAA
GTATGGAAGATAGACATAATGGACCTTCTTTTGAGTCCATGAAGATGAACTTTTTTTTTCCTTTTGTTGTGGGAGCCTCTCAACTCAAGTATTGCTCACTGAATCCTGTA
GTTCAGAGCCCACATCTTATGATTAGTAGTTAAATAGAGAGAAAGAAAGCTTTTGTAAGAACTATGATTGGTGGTTTTATGTAGAGATTGTTATATGGAAATCTCTTTTA
ATTATGAGTTTTTGGGTATAATGTTTCACTTTTGTATTATTCTA
Protein sequenceShow/hide protein sequence
MAFLSTFIAVKPSLLVVKPSPTTSSSSSSSLKHLNQLPLPDLRFPRTVTFAFASNQATAPRREPRGITKPRKISPELQALVGAPEISRTQALKVIWAYIKENNLQKPSDK
KVIVCDEKLKNIFGGKDEVGFLEIAGLISPHFL