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IVF0012638 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012638
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionArabinogalactan peptide
Genome locationchr03:26565582..26566137
RNA-Seq ExpressionIVF0012638
SyntenyIVF0012638
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585732.1 CXXC motif containing zinc binding protein, partial [Cucurbita argyrosperma subsp. sororia]1.43e-1381.82Show/hide
Query:  SLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI
        SL+ALIA+I  VASVAAQEAPAPSPASPA+SIAPS VSAC A FVAL  GSTLRI
Subjt:  SLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI

KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]3.70e-1262.5Show/hide
Query:  MAAVSKVSLVALIAIIFTVASVA---AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLR
        MAAVSK S +AL+A++FTV SVA   + E+PAP+PASPATS+ PS+  AC+ AFVAL FGS L+
Subjt:  MAAVSKVSLVALIAIIFTVASVA---AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLR

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]1.51e-2087.1Show/hide
Query:  MAAVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI
        MA VS+ SLVALIAI+F VASVAA EAPAPSPASPATSIAPS VSAC+AAFVALAFGSTLRI
Subjt:  MAAVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]3.34e-1262.5Show/hide
Query:  MAAVSKVSLVALIAIIFTVASVA---AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLR
        MAAVSK S +AL+A++FTV SVA   + E+PAP+PASPATS+ PS+  AC+ AFVAL FGS L+
Subjt:  MAAVSKVSLVALIAIIFTVASVA---AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLR

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]1.81e-2187.1Show/hide
Query:  MAAVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI
        MAA+SKVSL+ALIA+IF ++SVAAQEAPAPSPASPATSIAPS VSACLAAF+ALAFGSTLRI
Subjt:  MAAVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein7.7e-1587.1Show/hide
Query:  MAAVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI
        MAA+SKVSL+ALIA+IF ++SVAAQEAPAPSPASPATSIAPS VSACLAAF+ALAFGSTLRI
Subjt:  MAAVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI

A0A2P5DTQ4 Arabinogalactan peptide1.1e-0560Show/hide
Query:  AAVSKVSLVALIAIIFTVASVA----AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI
        A+ S  SL+ L+A+I TV SV     A EAPAPSPASPA++I+PS +SACLAA VAL FGS +R+
Subjt:  AAVSKVSLVALIAIIFTVASVA----AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI

A0A2P5EL16 Arabinogalactan peptide8.5e-0661.29Show/hide
Query:  SKVSLVALIAIIFTVASVA----AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI
        S  SL+ L+A+I TV SV     A EAPAPSPASPA++I+PS +SACLAA VAL FGS +R+
Subjt:  SKVSLVALIAIIFTVASVA----AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI

A0A2Z6NC77 Uncharacterized protein2.8e-0459.02Show/hide
Query:  AVSKVSLVALIAIIFTVASVA-AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI
        A + + L+A +A+IF+V S+A A +APAPSPASPATS++PS V+  +AA  ALAFGS LRI
Subjt:  AVSKVSLVALIAIIFTVASVA-AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI

Q96504 CRG166.5e-0659.38Show/hide
Query:  MAAVSKVSLVALIAIIFTVASVA---AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLR
        MAAVSKVS +AL+A++F V SVA   + E+PAP PASPA S+ PS+  AC+ AF+AL FGS L+
Subjt:  MAAVSKVSLVALIAIIFTVASVA---AQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLR

SwissProt top hitse value%identityAlignment
Q9LYF6 Arabinogalactan protein 157.0e-0553.33Show/hide
Query:  AVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI
        A+SK S+V L+ +I +V + A  EAPAPSP S +++I+ S VSA +AA  AL FGS LRI
Subjt:  AVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI

Arabidopsis top hitse value%identityAlignment
AT5G11740.1 arabinogalactan protein 155.0e-0653.33Show/hide
Query:  AVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI
        A+SK S+V L+ +I +V + A  EAPAPSP S +++I+ S VSA +AA  AL FGS LRI
Subjt:  AVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGTCTCCAAAGTTTCTCTCGTGGCTCTCATTGCCATCATCTTCACCGTTGCTTCCGTTGCCGCTCAGGAGGCTCCGGCTCCCAGTCCGGCCTCCCCTGCCAC
CTCTATTGCTCCTTCGGTCGTCTCCGCTTGCCTCGCTGCCTTCGTTGCTCTCGCCTTCGGATCTACTCTTAGGATCTGA
mRNA sequenceShow/hide mRNA sequence
CAATCAAAAGGGTCCTCCTGATCTCACAGTCTTCTCCTCTTTCAATTCCTCTCGCCCGAACCCTAACCCCCGAACACCTCTTCACCAATGGCCGCCGTCTCCAAAGTTTC
TCTCGTGGCTCTCATTGCCATCATCTTCACCGTTGCTTCCGTTGCCGCTCAGGAGGCTCCGGCTCCCAGTCCGGCCTCCCCTGCCACCTCTATTGCTCCTTCGGTCGTCT
CCGCTTGCCTCGCTGCCTTCGTTGCTCTCGCCTTCGGATCTACTCTTAGGATCTGAGGTATCGGCCTTCCGATGTGGTGATTGATTTTGCCATAGACTCTTCCATGTATT
TGTGATCTGCTTTTCTTTTTTTTTATCTCTCTTGAAGTATAACCTTGCGCGGCGGAGGAATTTGTTTTAGATGTTTTTCTAAGGGACTTTAATTTCTACACGTTTGGTAC
AGAGGACCTCTTTTGTTTACACATTCTTATATATAGAATGCAGGTTGTGTTGGTTTGATCACGATTGTGCTATATTTTGTTGGTTTTGATTAGTAAATAAATTGTTTCGT
TCTTTT
Protein sequenceShow/hide protein sequence
MAAVSKVSLVALIAIIFTVASVAAQEAPAPSPASPATSIAPSVVSACLAAFVALAFGSTLRI