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IVF0012656 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012656
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description60S ribosomal protein L18
Genome locationchr05:916888..917235
RNA-Seq ExpressionIVF0012656
SyntenyIVF0012656
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000039 - Ribosomal protein L18e
IPR021131 - Ribosomal protein L18e/L15P
IPR036227 - Ribosomal L18e/L15P superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041394.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa]7.45e-7498.26Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN
        MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALK FGPAPAVSHSHSEPYVRS GRN
Subjt:  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN

Query:  FERARGKRNSRGYGV
        FERARGKRNSRGYGV
Subjt:  FERARGKRNSRGYGV

KAG7030228.1 60S ribosomal protein L18-2 [Cucurbita argyrosperma subsp. argyrosperma]1.57e-5476.92Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        MKGKE +I+V+VG V D+IR+ EVPALK  ALR T+TAR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HSH++PYVRS G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FERARGKRNSRGY V
Subjt:  RNFERARGKRNSRGYGV

TYJ96153.1 60S ribosomal protein L18-2 [Cucumis melo var. makuwa]7.74e-76100Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN
        MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN
Subjt:  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN

Query:  FERARGKRNSRGYGV
        FERARGKRNSRGYGV
Subjt:  FERARGKRNSRGYGV

XP_008450608.1 PREDICTED: 60S ribosomal protein L18-2 [Cucumis melo]7.28e-5578.63Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        MKGKES+I+VVVG + D+IR+ EVPALK  ALR T+TAR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HSHS+PYVRS G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FERARGKRNSRGY V
Subjt:  RNFERARGKRNSRGYGV

XP_011659839.1 60S ribosomal protein L18-2 [Cucumis sativus]4.19e-5478.45Show/hide
Query:  KGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGR
        KGKES+I+VVVG + D+IR+ EVPALK  ALR T+TAR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HSHS+PYVRS GR
Subjt:  KGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGR

Query:  NFERARGKRNSRGYGV
         FERARGKRNSRGY V
Subjt:  NFERARGKRNSRGYGV

TrEMBL top hitse value%identityAlignment
A0A1S3BPL9 60S ribosomal protein L18-24.7e-4278.63Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        MKGKES+I+VVVG + D+IR+ EVPALK  ALR T+TAR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HSHS+PYVRS G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FERARGKRNSRGY V
Subjt:  RNFERARGKRNSRGYGV

A0A5A7TD77 60S ribosomal protein L18-29.8e-5698.26Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN
        MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALK FGPAPAVSHSHSEPYVRS GRN
Subjt:  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN

Query:  FERARGKRNSRGYGV
        FERARGKRNSRGYGV
Subjt:  FERARGKRNSRGYGV

A0A5A7U3L4 60S ribosomal protein L18-31.8e-4177.78Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        MKGKE++I+VVVG V D+IR+ EVPALK  ALR T+TAR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HSH++PYVRS G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FERARGKRNSRGY V
Subjt:  RNFERARGKRNSRGYGV

A0A5A7U942 60S ribosomal protein L18-24.7e-4278.63Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        MKGKES+I+VVVG + D+IR+ EVPALK  ALR T+TAR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HSHS+PYVRS G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FERARGKRNSRGY V
Subjt:  RNFERARGKRNSRGYGV

A0A5D3BA35 60S ribosomal protein L18-23.0e-57100Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN
        MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN
Subjt:  MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN

Query:  FERARGKRNSRGYGV
        FERARGKRNSRGYGV
Subjt:  FERARGKRNSRGYGV

SwissProt top hitse value%identityAlignment
O22254 Putative 60S ribosomal protein L18-17.3e-3260.17Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPAL--KALRLTQTARSRIEKAGWECLTFDQLAFRAHL-GQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSN
        M GK+ +I+V+VG V D++RI +VPAL   ALR T++AR+RI KAG ECLTFDQLA       +NTVLLRGPKN++EA+K FGPAP V HSH++PYVR  
Subjt:  MKGKESRISVVVGNVADEIRICEVPAL--KALRLTQTARSRIEKAGWECLTFDQLAFRAHL-GQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSN

Query:  GRNFERARGKRNSRGYGV
        G+  E ARG+R SRG+ V
Subjt:  GRNFERARGKRNSRGYGV

O65729 60S ribosomal protein L18 (Fragment)3.2e-3564.96Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        M+GKE +I VVVG V D+IR+ +VP +K  AL+ T+TAR+RI+KAG ECLTFDQLA R  L  +TVLLRGPKN++EA+K FGPAP V HSH++PYVRS G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FE+ARG+R SRG+ V
Subjt:  RNFERARGKRNSRGYGV

P42791 60S ribosomal protein L18-27.3e-4069.23Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        M GKE +I+V+VG + D++R+ E+PA+K  ALR T+ AR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HSHS+PYVR+ G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FE+ARGKR SRG+ V
Subjt:  RNFERARGKRNSRGYGV

Q4PM04 60S ribosomal protein L182.1e-3161.06Show/hide
Query:  GKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN
        G+E+ I+VVVG V D++R+ +VP L+  ALR+T+ AR+RI KAG E LTFDQLA +A  G+ TVL++GP+NS+EA + FGPAP V HSH++PYVRS GR 
Subjt:  GKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRN

Query:  FERARGKRNSRGY
        FERARG+R SR Y
Subjt:  FERARGKRNSRGY

Q940B0 60S ribosomal protein L18-34.0e-3866.67Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        M GK+ +I+V+VG + D++R+ E+PA+K  ALR T+ AR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HS+++PYVR  G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FE+ARGKR SRG+ V
Subjt:  RNFERARGKRNSRGYGV

Arabidopsis top hitse value%identityAlignment
AT2G47570.1 Ribosomal protein L18e/L15 superfamily protein5.2e-3360.17Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPAL--KALRLTQTARSRIEKAGWECLTFDQLAFRAHL-GQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSN
        M GK+ +I+V+VG V D++RI +VPAL   ALR T++AR+RI KAG ECLTFDQLA       +NTVLLRGPKN++EA+K FGPAP V HSH++PYVR  
Subjt:  MKGKESRISVVVGNVADEIRICEVPAL--KALRLTQTARSRIEKAGWECLTFDQLAFRAHL-GQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSN

Query:  GRNFERARGKRNSRGYGV
        G+  E ARG+R SRG+ V
Subjt:  GRNFERARGKRNSRGYGV

AT2G47570.2 Ribosomal protein L18e/L15 superfamily protein5.2e-3360.17Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPAL--KALRLTQTARSRIEKAGWECLTFDQLAFRAHL-GQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSN
        M GK+ +I+V+VG V D++RI +VPAL   ALR T++AR+RI KAG ECLTFDQLA       +NTVLLRGPKN++EA+K FGPAP V HSH++PYVR  
Subjt:  MKGKESRISVVVGNVADEIRICEVPAL--KALRLTQTARSRIEKAGWECLTFDQLAFRAHL-GQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSN

Query:  GRNFERARGKRNSRGYGV
        G+  E ARG+R SRG+ V
Subjt:  GRNFERARGKRNSRGYGV

AT3G05590.1 ribosomal protein L185.2e-4169.23Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        M GKE +I+V+VG + D++R+ E+PA+K  ALR T+ AR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HSHS+PYVR+ G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FE+ARGKR SRG+ V
Subjt:  RNFERARGKRNSRGYGV

AT5G27850.1 Ribosomal protein L18e/L15 superfamily protein2.8e-3966.67Show/hide
Query:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG
        M GK+ +I+V+VG + D++R+ E+PA+K  ALR T+ AR+RIEKAG ECLTFDQLA RA LGQNTVLLRGPKNS+EA+K FGPAP V HS+++PYVR  G
Subjt:  MKGKESRISVVVGNVADEIRICEVPALK--ALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNG

Query:  RNFERARGKRNSRGYGV
        R FE+ARGKR SRG+ V
Subjt:  RNFERARGKRNSRGYGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGAAAGGAAAGTAGAATTTCTGTTGTTGTTGGGAATGTTGCCGATGAAATTCGCATCTGTGAAGTTCCAGCACTGAAAGCTCTAAGGCTCACTCAGACAGCAAG
GTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGACATTTGACCAGCTTGCTTTTAGGGCTCATCTGGGTCAGAACACGGTTCTTCTTAGAGGTCCTAAGAACTCCCAAG
AGGCATTAAAGCTTTTCGGTCCAGCACCTGCTGTGTCACACAGCCATTCCGAGCCATATGTGAGGTCTAATGGAAGGAATTTCGAGAGGGCTAGAGGAAAGAGGAACAGC
AGGGGATATGGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGAAAGGAAAGTAGAATTTCTGTTGTTGTTGGGAATGTTGCCGATGAAATTCGCATCTGTGAAGTTCCAGCACTGAAAGCTCTAAGGCTCACTCAGACAGCAAG
GTCAAGGATCGAAAAGGCTGGCTGGGAATGTTTGACATTTGACCAGCTTGCTTTTAGGGCTCATCTGGGTCAGAACACGGTTCTTCTTAGAGGTCCTAAGAACTCCCAAG
AGGCATTAAAGCTTTTCGGTCCAGCACCTGCTGTGTCACACAGCCATTCCGAGCCATATGTGAGGTCTAATGGAAGGAATTTCGAGAGGGCTAGAGGAAAGAGGAACAGC
AGGGGATATGGAGTTTGA
Protein sequenceShow/hide protein sequence
MKGKESRISVVVGNVADEIRICEVPALKALRLTQTARSRIEKAGWECLTFDQLAFRAHLGQNTVLLRGPKNSQEALKLFGPAPAVSHSHSEPYVRSNGRNFERARGKRNS
RGYGV