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IVF0012709 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012709
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr05:21820481..21821364
RNA-Seq ExpressionIVF0012709
SyntenyIVF0012709
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040709.1 hypothetical protein E6C27_scaffold529G00290 [Cucumis melo var. makuwa]2.89e-8056.13Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ
        MRKT LIEVRLKIRHNYT  I AQINI ++K NI TVQT+SYTEGRWFK+RNANIHGSF +QAAL+FNEFDF+A++YSFMRF + PP+K++KK +   K 
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ

Query:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF
        +RNSN+R +I NS DSTSKAIIISDN DGGRGSDERLKSVIS                                               AKPL+IESPTF
Subjt:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF

Query:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK----------LNAKQIVDIEKKENAINLKVEMG
        K + T LDR   PLKISP K T+IH+K KS +MIY+          L+AKQIV+ EKKE   NL V++G
Subjt:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK----------LNAKQIVDIEKKENAINLKVEMG

KAA0047508.1 putative amidohydrolase ytcJ [Cucumis melo var. makuwa]7.44e-4582.8Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKK
        MRKTDLIEVRLKIRHNYTGFIPAQINI +SKGNI T+QTVS+TE RWFK+RNANIH  F +QAALEFNEFDF+AEKYSFM FV  PP+KKDKK
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKK

KAA0062230.1 hypothetical protein E6C27_scaffold321G00310 [Cucumis melo var. makuwa]6.17e-3637.72Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ
        MRK DLIE RLKI+HNYTGFI AQINI NSKGNI T+ TVSYTEGRW                                                     
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ

Query:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF
                                       G+D RLK VISG+MDKGK IMVF D  E  +K  F KRK                              
Subjt:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF

Query:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAK-----QIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI
                  IKPLKI+P K T+  KKKKS + IY++        ++V+ EKKE AINL +E+GNI PL E++EVE+VSS DSPIMT I
Subjt:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAK-----QIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI

KAA0063733.1 hypothetical protein E6C27_scaffold1290G00140 [Cucumis melo var. makuwa]7.03e-12669.05Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ
        MRK+DLIEVRLKIRHNY  FIPAQINIMNSKGNI TVQTVS+TEGRWFK+RNANIHGSF +QAALEFNEFDF+AEKYSFM FV+ PPEKKDKK +   K 
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ

Query:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF
        ++NSNKR  I NS DSTSKAIII +N DGGR SD RLK VISG+MDKGK IMVF +  + +Q   FPKRKVSF SPKNK FFYNP+ A AK L+IES  F
Subjt:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF

Query:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK----------LNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI
        K S  S DR +KPLKIS PK+T + KK+KS +MIY+          LNAK+++D EKKE AINL V++GNISPL E+MEV++VSS +SPIMT I
Subjt:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK----------LNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI

TYK07346.1 hypothetical protein E5676_scaffold202G00620 [Cucumis melo var. makuwa]7.64e-8454.86Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQR---NP
        MRKTDLIEVR KIRHNYTGFIPAQI I +SKGNI TVQTVS+TEGR FK+RNANIHGSF +QAALEFNEFDF AEKY FM FV+ PPEKK K+++   NP
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQR---NP

Query:  HKQNRNSNKRLAILNSRDSTSKAIII-SDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIE
         K +RNSNKR  I NS DSTSKAIII S+N+D GRG+D RLKS+I+ KMDK   IMVF D H+ +Q+  FPKRKV                         
Subjt:  HKQNRNSNKRLAILNSRDSTSKAIII-SDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIE

Query:  SPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI
                                   I++ K ++    +L+A+ + + EKKE AINL V++GNISPL E+MEVE++SS DSP+MT I
Subjt:  SPTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI

TrEMBL top hitse value%identityAlignment
A0A5A7THF9 Uncharacterized protein2.0e-6556.13Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ
        MRKT LIEVRLKIRHNYT  I AQINI ++K NI TVQT+SYTEGRWFK+RNANIHGSF +QAAL+FNEFDF+A++YSFMRF + PP+K++KK +   K 
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ

Query:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF
        +RNSN+R +I NS DSTSKAIIISDN DGGRGSDERLKSVIS                                               AKPL+IESPTF
Subjt:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF

Query:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK----------LNAKQIVDIEKKENAINLKVEMG
        K + T LDR   PLKISP K T+IH+K KS +MIY+          L+AKQIV+ EKKE   NL V++G
Subjt:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK----------LNAKQIVDIEKKENAINLKVEMG

A0A5A7V4L2 Uncharacterized protein3.5e-3037.72Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ
        MRK DLIE RLKI+HNYTGFI AQINI NSKGNI T+ TVSYTEGRW                                                     
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ

Query:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF
                                       G+D RLK VISG+MDKGK IMVF D  E  +K  F KRK                              
Subjt:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF

Query:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAK-----QIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI
                  IKPLKI+P K T+  KKKKS + IY++        ++V+ EKKE AINL +E+GNI PL E++EVE+VSS DSPIMT I
Subjt:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAK-----QIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI

A0A5A7V6K4 Uncharacterized protein4.2e-10069.05Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ
        MRK+DLIEVRLKIRHNY  FIPAQINIMNSKGNI TVQTVS+TEGRWFK+RNANIHGSF +QAALEFNEFDF+AEKYSFM FV+ PPEKKDKK +   K 
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQ

Query:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF
        ++NSNKR  I NS DSTSKAIII +N DGGR SD RLK VISG+MDKGK IMVF +  + +Q   FPKRKVSF SPKNK FFYNP+ A AK L+IES  F
Subjt:  NRNSNKRLAILNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTF

Query:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK----------LNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI
        K S  S DR +KPLKIS PK+T + KK+KS +MIY+          LNAK+++D EKKE AINL V++GNISPL E+MEV++VSS +SPIMT I
Subjt:  KGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYK----------LNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI

A0A5D3CAI5 Uncharacterized protein6.1e-6754.7Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPE--KKDKKQRNPH
        MRKTDLIEVR KIRHNYTGFIPAQI I +SKGNI TVQTVS+TEGR FK+RNANIHGSF +QAALEFNEFDF AEKY FM FV+ PPE  KK+KK +   
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPE--KKDKKQRNPH

Query:  KQNRNSNKRLAILNSRDSTSKA-IIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIES
        K +RNSNKR  I NS DSTSKA IIIS+N+D GRG+D RLKS+I+ KMDK   IMVF D H+ +Q+  FPKRKV                          
Subjt:  KQNRNSNKRLAILNSRDSTSKA-IIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIES

Query:  PTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI
                                  I++ K ++    +L+A+ + + EKKE AINL V++GNISPL E+MEVE++SS DSP+MT I
Subjt:  PTFKGSPTSLDRIIKPLKISPPKATFIHKKKKSSQMIYKLNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI

A0A5D3DT94 Putative amidohydrolase ytcJ1.1e-3478.79Show/hide
Query:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHK
        MRKTDLIEVRLKIRHNYTGFIPAQINI +SKGNI T+QTVS+TE RWFK+RNANIH  F +QAALEFNEFDF+AEKYSFM FV  PP+KKDKK +   K
Subjt:  MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAGACAGATTTAATTGAAGTTAGGTTGAAAATCAGGCACAACTACACAGGCTTCATTCCAGCACAAATCAACATTATGAACAGTAAAGGTAATATTTCTACAGT
TCAAACCGTATCATATACTGAAGGAAGGTGGTTTAAGAAGAGAAATGCAAACATTCACGGTTCTTTTAACAAACAAGCTGCTTTAGAGTTCAATGAATTTGATTTTAAAG
CTGAGAAATATTCTTTCATGAGGTTCGTTTCCATTCCACCAGAGAAAAAAGATAAAAAGCAAAGGAATCCACACAAGCAAAATCGGAATAGTAACAAACGGTTGGCCATT
TTAAATTCTCGAGATTCAACTTCCAAAGCCATCATTATCTCTGACAACTATGATGGAGGTAGGGGTAGTGATGAAAGGCTTAAATCTGTCATTTCAGGGAAGATGGACAA
AGGAAAGGACATTATGGTATTTGTTGACCATCATGAGTTGTTACAAAAGAACAAATTTCCAAAAAGGAAAGTTAGCTTCCACTCACCAAAAAACAAGGCTTTCTTTTACA
ACCCTGAAAATGCCCTTGCAAAACCACTTCAAATTGAGAGCCCTACCTTTAAAGGAAGTCCTACAAGCCTTGATAGAATTATTAAACCTTTGAAAATCAGCCCACCAAAA
GCTACTTTCATCCACAAGAAAAAGAAAAGCTCTCAGATGATTTACAAACTCAATGCTAAACAAATTGTGGACATAGAGAAGAAGGAGAATGCCATAAACCTGAAAGTGGA
AATGGGGAACATATCTCCCCTTCATGAGAAAATGGAAGTGGAATATGTCTCTAGCTCAGACTCTCCAATCATGACTTCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAGACAGATTTAATTGAAGTTAGGTTGAAAATCAGGCACAACTACACAGGCTTCATTCCAGCACAAATCAACATTATGAACAGTAAAGGTAATATTTCTACAGT
TCAAACCGTATCATATACTGAAGGAAGGTGGTTTAAGAAGAGAAATGCAAACATTCACGGTTCTTTTAACAAACAAGCTGCTTTAGAGTTCAATGAATTTGATTTTAAAG
CTGAGAAATATTCTTTCATGAGGTTCGTTTCCATTCCACCAGAGAAAAAAGATAAAAAGCAAAGGAATCCACACAAGCAAAATCGGAATAGTAACAAACGGTTGGCCATT
TTAAATTCTCGAGATTCAACTTCCAAAGCCATCATTATCTCTGACAACTATGATGGAGGTAGGGGTAGTGATGAAAGGCTTAAATCTGTCATTTCAGGGAAGATGGACAA
AGGAAAGGACATTATGGTATTTGTTGACCATCATGAGTTGTTACAAAAGAACAAATTTCCAAAAAGGAAAGTTAGCTTCCACTCACCAAAAAACAAGGCTTTCTTTTACA
ACCCTGAAAATGCCCTTGCAAAACCACTTCAAATTGAGAGCCCTACCTTTAAAGGAAGTCCTACAAGCCTTGATAGAATTATTAAACCTTTGAAAATCAGCCCACCAAAA
GCTACTTTCATCCACAAGAAAAAGAAAAGCTCTCAGATGATTTACAAACTCAATGCTAAACAAATTGTGGACATAGAGAAGAAGGAGAATGCCATAAACCTGAAAGTGGA
AATGGGGAACATATCTCCCCTTCATGAGAAAATGGAAGTGGAATATGTCTCTAGCTCAGACTCTCCAATCATGACTTCAATTTAA
Protein sequenceShow/hide protein sequence
MRKTDLIEVRLKIRHNYTGFIPAQINIMNSKGNISTVQTVSYTEGRWFKKRNANIHGSFNKQAALEFNEFDFKAEKYSFMRFVSIPPEKKDKKQRNPHKQNRNSNKRLAI
LNSRDSTSKAIIISDNYDGGRGSDERLKSVISGKMDKGKDIMVFVDHHELLQKNKFPKRKVSFHSPKNKAFFYNPENALAKPLQIESPTFKGSPTSLDRIIKPLKISPPK
ATFIHKKKKSSQMIYKLNAKQIVDIEKKENAINLKVEMGNISPLHEKMEVEYVSSSDSPIMTSI