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IVF0012714 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012714
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related pol polyprotein from transposon tnt 1-94
Genome locationchr10:8270269..8271011
RNA-Seq ExpressionIVF0012714
SyntenyIVF0012714
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006508 - proteolysis (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031317.1 uncharacterized protein E6C27_scaffold139G00700 [Cucumis melo var. makuwa]1.12e-4676.87Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNEE--DDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ
        +SLEMIDA+VD          KEKEIEDNEE  +DDNH ENKSKMVHDTSNKVKVVQEK KVKIMEIA NIE ARPKRQPKPSKKVLENVKEQK      
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNEE--DDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ

Query:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
         N RGKKNDSPKPTR+SP I+DLAPSF LQISQL
Subjt:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

KAA0037325.1 hypothetical protein E6C27_scaffold278G00130 [Cucumis melo var. makuwa]2.95e-79100Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNEEDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQKN
        MSLEMIDANVDANIDKATACAKEKEIEDNEEDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQKN
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNEEDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQKN

Query:  ARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
        ARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
Subjt:  ARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

KAA0065297.1 hypothetical protein E6C27_scaffold1023G00110 [Cucumis melo var. makuwa]1.35e-4876.87Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNEE--DDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ
        +SLEMIDA+VD          KEKEIEDNEE  +DDNH ENKSKMVHDTSNKVKVVQEK KVKIMEIA NIE ARPKRQPKPSKKVLENVKEQK      
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNEE--DDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ

Query:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
         N RGKKNDSPKPT+HSP I+DLAPSF LQISQL
Subjt:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

TYK15261.1 hypothetical protein E5676_scaffold892G00380 [Cucumis melo var. makuwa]3.85e-4876.87Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNEE--DDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ
        +SLEMIDA+VD          KEKEIEDNEE  +DDNH ENKSKMVHDTSNKVKVVQEK KVKIMEIA NIE ARPKRQPKPSKKVLENVKEQK      
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNEE--DDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ

Query:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
         N RGKKNDSPKPTR+SP I+DLAPSF LQISQL
Subjt:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

TYK22453.1 uncharacterized protein E5676_scaffold3009G00010 [Cucumis melo var. makuwa]1.12e-4676.87Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNEE--DDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ
        +SLEMIDA+VD          KEKEIEDNEE  +DDNH ENKSKMVHDTSNKVKVVQEK KVKIMEIA NIE ARPKRQPKPSKKVLENVKEQK      
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNEE--DDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ

Query:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
         N RGKKNDSPKPTR+SP I+DLAPSF LQISQL
Subjt:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

TrEMBL top hitse value%identityAlignment
A0A5A7T785 Uncharacterized protein2.0e-60100Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNEEDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQKN
        MSLEMIDANVDANIDKATACAKEKEIEDNEEDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQKN
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNEEDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQKN

Query:  ARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
        ARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
Subjt:  ARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

A0A5A7VDY1 Uncharacterized protein8.1e-3876.87Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNE--EDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ
        +SLEMIDA+VD          KEKEIEDNE  E+DDNH ENKSKMVHDTSNKVKVVQEK KVKIMEIA NIE ARPKRQPKPSKKVLENVKE       Q
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNE--EDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ

Query:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
        KN RGKKNDSPKPT+HSP I+DLAPSF LQISQL
Subjt:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

A0A5A7VIA9 Uncharacterized protein1.8e-3776.87Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNE--EDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ
        +SLEMIDA+VD          KEKEIEDNE  E+DDNH ENKSKMVHDTSNKVKVVQEK KVKIMEIA NIE ARPKRQPKPSKKVLENVKE       Q
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNE--EDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ

Query:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
        KN RGKKNDSPKPTR+SP I+DLAPSF LQISQL
Subjt:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

A0A5D3CTS8 Uncharacterized protein1.8e-3776.87Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNE--EDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ
        +SLEMIDA+VD          KEKEIEDNE  E+DDNH ENKSKMVHDTSNKVKVVQEK KVKIMEIA NIE ARPKRQPKPSKKVLENVKE       Q
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNE--EDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ

Query:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
        KN RGKKNDSPKPTR+SP I+DLAPSF LQISQL
Subjt:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

A0A5D3DFX6 Uncharacterized protein1.8e-3776.87Show/hide
Query:  MSLEMIDANVDANIDKATACAKEKEIEDNE--EDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ
        +SLEMIDA+VD          KEKEIEDNE  E+DDNH ENKSKMVHDTSNKVKVVQEK KVKIMEIA NIE ARPKRQPKPSKKVLENVKE       Q
Subjt:  MSLEMIDANVDANIDKATACAKEKEIEDNE--EDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQ

Query:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL
        KN RGKKNDSPKPTR+SP I+DLAPSF LQISQL
Subjt:  KNARGKKNDSPKPTRHSPIIKDLAPSFALQISQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTAGAAATGATAGATGCTAATGTTGATGCTAACATTGATAAAGCAACCGCTTGTGCAAAAGAGAAAGAGATTGAGGATAACGAGGAAGATGATGATAATCATCA
TGAAAATAAGTCAAAAATGGTGCATGACACATCAAACAAAGTGAAGGTTGTTCAAGAAAAGGAAAAAGTGAAAATTATGGAAATAGCGAAGAATATTGAAAATGCTAGGC
CGAAGAGACAACCTAAACCATCAAAGAAAGTGTTGGAGAATGTGAAAGAGCAAAAGAAAGAAAAAGATCATCAAAAGAATGCAAGAGGCAAGAAGAATGATTCTCCAAAA
CCAACAAGACATTCTCCTATAATAAAAGATCTTGCACCTAGTTTTGCTTTGCAAATATCTCAATTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTAGAAATGATAGATGCTAATGTTGATGCTAACATTGATAAAGCAACCGCTTGTGCAAAAGAGAAAGAGATTGAGGATAACGAGGAAGATGATGATAATCATCA
TGAAAATAAGTCAAAAATGGTGCATGACACATCAAACAAAGTGAAGGTTGTTCAAGAAAAGGAAAAAGTGAAAATTATGGAAATAGCGAAGAATATTGAAAATGCTAGGC
CGAAGAGACAACCTAAACCATCAAAGAAAGTGTTGGAGAATGTGAAAGAGCAAAAGAAAGAAAAAGATCATCAAAAGAATGCAAGAGGCAAGAAGAATGATTCTCCAAAA
CCAACAAGACATTCTCCTATAATAAAAGATCTTGCACCTAGTTTTGCTTTGCAAATATCTCAATTATAA
Protein sequenceShow/hide protein sequence
MSLEMIDANVDANIDKATACAKEKEIEDNEEDDDNHHENKSKMVHDTSNKVKVVQEKEKVKIMEIAKNIENARPKRQPKPSKKVLENVKEQKKEKDHQKNARGKKNDSPK
PTRHSPIIKDLAPSFALQISQL