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IVF0012734 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012734
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr09:9580173..9580412
RNA-Seq ExpressionIVF0012734
SyntenyIVF0012734
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031678.1 retrotransposon protein [Cucumis melo var. makuwa]1.88e-3483.33Show/hide
Query:  EFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        EFGNDQLKTI +WPKEKR TEVELR EVVKQLQ+I +L S+DRAKLMQILF SVEAIEGFLSIP +LKLEYCNILL+N
Subjt:  EFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

KAA0033290.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.70e-3486.08Show/hide
Query:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        +EFGNDQLK IANWPKEKR TEVELRAEV+KQLQ+I EL SRDRAKL+QILF SVEAIEGFLSIP E KLEYCNILLQN
Subjt:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

KAA0063430.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.15e-3486.08Show/hide
Query:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        MEFGNDQLK IANWPKEKR TEVEL  EVVKQLQ+I EL S+DRAKLMQILF SVE IEGFLSIP+ELKLEYCNILLQN
Subjt:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

KAA0066604.1 retrotransposon protein [Cucumis melo var. makuwa]1.01e-46100Show/hide
Query:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
Subjt:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.97e-3381.01Show/hide
Query:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        MEFGN+QLK IA+WPKEKR  EVE+RA+VVKQLQ+I +L S+DRAKLMQILF S+EAIEGFLSIP ELKLEYCNILLQN
Subjt:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

TrEMBL top hitse value%identityAlignment
A0A5A7SQU2 Putative nuclease HARBI13.5e-2886.08Show/hide
Query:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        +EFGNDQLK IANWPKEKR TEVELRAEV+KQLQ+I EL SRDRAKL+QILF SVEAIEGFLSIP E KLEYCNILLQN
Subjt:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

A0A5A7U0H7 Retrotransposon protein1.9e-2681.01Show/hide
Query:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        MEFGN+QLK IA+WPKEKR  EVE+RA+VVKQLQ+I +L S+DRAKLMQILF S+EAIEGFLSIP ELKLEYCNILLQN
Subjt:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

A0A5A7V8C5 Putative nuclease HARBI13.5e-2886.08Show/hide
Query:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        MEFGNDQLK IANWPKEKR TEVEL  EVVKQLQ+I EL S+DRAKLMQILF SVE IEGFLSIP+ELKLEYCNILLQN
Subjt:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

A0A5D3BZU3 Retrotransposon protein8.6e-2783.33Show/hide
Query:  EFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        EFGNDQLKTI +WPKEKR TEVELR EVVKQLQ+I +L S+DRAKLMQILF SVEAIEGFLSIP +LKLEYCNILL+N
Subjt:  EFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

A0A5D3CT52 Retrotransposon protein5.0e-35100Show/hide
Query:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
        MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN
Subjt:  MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGGAAATGATCAATTAAAGACAATTGCAAATTGGCCAAAAGAGAAGCGTGTAACAGAGGTCGAATTGCGTGCTGAAGTTGTGAAACAGCTGCAAAATATCCT
TGAACTACCAAGCCGAGATAGGGCAAAACTTATGCAAATCCTATTCCATAGTGTGGAGGCCATTGAGGGATTCTTGTCGATTCCAATAGAACTTAAATTGGAGTATTGCA
ATATTCTCTTGCAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGGAAATGATCAATTAAAGACAATTGCAAATTGGCCAAAAGAGAAGCGTGTAACAGAGGTCGAATTGCGTGCTGAAGTTGTGAAACAGCTGCAAAATATCCT
TGAACTACCAAGCCGAGATAGGGCAAAACTTATGCAAATCCTATTCCATAGTGTGGAGGCCATTGAGGGATTCTTGTCGATTCCAATAGAACTTAAATTGGAGTATTGCA
ATATTCTCTTGCAAAATTAG
Protein sequenceShow/hide protein sequence
MEFGNDQLKTIANWPKEKRVTEVELRAEVVKQLQNILELPSRDRAKLMQILFHSVEAIEGFLSIPIELKLEYCNILLQN