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IVF0012737 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012737
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:20366055..20366407
RNA-Seq ExpressionIVF0012737
SyntenyIVF0012737
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]9.27e-1949.02Show/hide
Query:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWRE------------YGRIEYGIDRNVMVVLQGQVTKINK
        ++K CLHH I KCVLM++FYF             F GG+LR SYNQ K  LD M SNS E R+             GR + G+DRN MV LQGQVT++NK
Subjt:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWRE------------YGRIEYGIDRNVMVVLQGQVTKINK

Query:  LL
        LL
Subjt:  LL

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]1.85e-2554.17Show/hide
Query:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWREY---------------GRIEYGIDRNVMVVLQGQVTK
        MIKRC HHCI +CVLM+QFYFG            FTGGMLR SYNQIK  LD MASNS EWR+                GRIE GID ++MV LQGQV +
Subjt:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWREY---------------GRIEYGIDRNVMVVLQGQVTK

Query:  INKLLKSMPLSQVNAAGSYV
        +N +L+SM L QVN   S V
Subjt:  INKLLKSMPLSQVNAAGSYV

KAA0067857.1 hypothetical protein E6C27_scaffold2484G00700 [Cucumis melo var. makuwa]2.23e-1447.19Show/hide
Query:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWREYGRIEYGIDRNVMVVLQGQVTKINKL
        MIK C HHCI + VLM+QFYFG            F GGMLR S NQIK TLD M +             G+DRN MV L+G+  K++KL
Subjt:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWREYGRIEYGIDRNVMVVLQGQVTKINKL

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]3.82e-2450Show/hide
Query:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEW-------REYGRIEYGIDRNVMVVLQGQVTKINKLLKSM
        ++K C  H I +CV M+ FYFG            F GGMLR SYNQIK TLD+M++NS EW       R  GR + G+D++V+VVLQGQ+  +N LL+SM
Subjt:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEW-------REYGRIEYGIDRNVMVVLQGQVTKINKLLKSM

Query:  PLSQVNAAGSYV
         LSQVNAA +Y+
Subjt:  PLSQVNAAGSYV

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]4.78e-2650.83Show/hide
Query:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWR---------------EYGRIEYGIDRNVMVVLQGQVTK
        M+K CLHH IL CV+++QFYFG            F GGMLRLS N IK TLDAM SNS EWR               E GR   G + N M+ LQ QVT+
Subjt:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWR---------------EYGRIEYGIDRNVMVVLQGQVTK

Query:  INKLLKSMPLSQVNAAGSYV
        +NKLL+SM LSQ+NA GS +
Subjt:  INKLLKSMPLSQVNAAGSYV

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein1.3e-1850Show/hide
Query:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEW-------REYGRIEYGIDRNVMVVLQGQVTKINKLLKSM
        ++K C  H I +CV M+ FYFG            F GGMLR SYNQIK TLD+M++NS EW       R  GR + G+D++V+VVLQGQ+  +N LL+SM
Subjt:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEW-------REYGRIEYGIDRNVMVVLQGQVTKINKLLKSM

Query:  PLSQVNAAGSYV
         LSQVNAA +Y+
Subjt:  PLSQVNAAGSYV

A0A0A0L0Y4 Uncharacterized protein9.1e-2050.83Show/hide
Query:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEW---------------REYGRIEYGIDRNVMVVLQGQVTK
        M+K CLHH IL CV+++QFYFG            F GGMLRLS N IK TLDAM SNS EW               RE GR   G + N M+ LQ QVT+
Subjt:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEW---------------REYGRIEYGIDRNVMVVLQGQVTK

Query:  INKLLKSMPLSQVNAAGSYV
        +NKLL+SM LSQ+NA GS +
Subjt:  INKLLKSMPLSQVNAAGSYV

A0A5A7TUE1 Uncharacterized protein4.4e-1449.02Show/hide
Query:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWRE------------YGRIEYGIDRNVMVVLQGQVTKINK
        ++K CLHH I KCVLM++FYF             F GG+LR SYNQ K  LD M SNS E R+             GR + G+DRN MV LQGQVT++NK
Subjt:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWRE------------YGRIEYGIDRNVMVVLQGQVTKINK

Query:  LL
        LL
Subjt:  LL

A0A5D3CC26 Uncharacterized protein4.9e-2154.17Show/hide
Query:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWRE---------------YGRIEYGIDRNVMVVLQGQVTK
        MIKRC HHCI +CVLM+QFYFG            FTGGMLR SYNQIK  LD MASNS EWR+                GRIE GID ++MV LQGQV +
Subjt:  MIKRCLHHCILKCVLMDQFYFG------------FTGGMLRLSYNQIKKTLDAMASNSLEWRE---------------YGRIEYGIDRNVMVVLQGQVTK

Query:  INKLLKSMPLSQVNAAGSYV
        +N +L+SM L QVN   S V
Subjt:  INKLLKSMPLSQVNAAGSYV

A0A5D3D2S0 Uncharacterized protein5.9e-1156.58Show/hide
Query:  MLRLSYNQIKKTLDAMASNSLEWRE---------YGRIEYGIDRNVMVVLQGQVTKINKLLKSMPLSQVNAAGSYV
        ML+ SY QIK TLDA+ +NS E R+          GR + G+DRNV+V LQGQVTK+ KLL+SM LSQV+A G+YV
Subjt:  MLRLSYNQIKKTLDAMASNSLEWRE---------YGRIEYGIDRNVMVVLQGQVTKINKLLKSMPLSQVNAAGSYV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGAGATGTCTGCATCACTGCATCCTAAAATGCGTTTTGATGGACCAATTCTACTTTGGGTTTACTGGTGGGATGTTGAGATTGTCTTACAACCAGATCAAGAA
AACGTTGGACGCTATGGCCAGCAATAGCCTGGAATGGAGAGAATACGGAAGAATAGAATATGGAATAGATAGAAATGTGATGGTGGTGTTACAAGGCCAAGTCACTAAAA
TAAACAAACTCCTTAAATCAATGCCATTATCGCAAGTTAATGCCGCAGGGAGCTATGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGAGATGTCTGCATCACTGCATCCTAAAATGCGTTTTGATGGACCAATTCTACTTTGGGTTTACTGGTGGGATGTTGAGATTGTCTTACAACCAGATCAAGAA
AACGTTGGACGCTATGGCCAGCAATAGCCTGGAATGGAGAGAATACGGAAGAATAGAATATGGAATAGATAGAAATGTGATGGTGGTGTTACAAGGCCAAGTCACTAAAA
TAAACAAACTCCTTAAATCAATGCCATTATCGCAAGTTAATGCCGCAGGGAGCTATGTTTAG
Protein sequenceShow/hide protein sequence
MIKRCLHHCILKCVLMDQFYFGFTGGMLRLSYNQIKKTLDAMASNSLEWREYGRIEYGIDRNVMVVLQGQVTKINKLLKSMPLSQVNAAGSYV