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IVF0012742 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012742
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTub domain-containing protein
Genome locationchr12:3207969..3208358
RNA-Seq ExpressionIVF0012742
SyntenyIVF0012742
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037880.1 uncharacterized protein E6C27_scaffold36G00470 [Cucumis melo var. makuwa]1.55e-2287.93Show/hide
Query:  MRNPENATTQPPPCRSACRTTKACQAALKVEPQSSIGSLYHRLLSTISIVTVICVLGS
        MRN EN T QPPPCRSACRTTKA QAALKVEPQSSIGSLYHRLLSTI+IVTVI VLG+
Subjt:  MRNPENATTQPPPCRSACRTTKACQAALKVEPQSSIGSLYHRLLSTISIVTVICVLGS
KAA0053092.1 uncharacterized protein E6C27_scaffold778G00180 [Cucumis melo var. makuwa]1.06e-2789.23Show/hide
Query:  RLCTRTSMRNPENATTQPPPCRSACRTTKACQAALKVEPQSSIGSLYHRLLSTISIVTVICVLGS
        +LCTRT MRNPENAT QPPP RSACRTTKAC AALKVEPQSSIGSLYHRLLSTI+IVTVI VLGS
Subjt:  RLCTRTSMRNPENATTQPPPCRSACRTTKACQAALKVEPQSSIGSLYHRLLSTISIVTVICVLGS
TrEMBL top hitse value%identityAlignment
A0A5A7T3H0 Tub domain-containing protein1.3e-1687.93Show/hide
Query:  MRNPENATTQPPPCRSACRTTKACQAALKVEPQSSIGSLYHRLLSTISIVTVICVLGS
        MRN EN T QPPPCRSACRTTKA QAALKVEPQSSIGSLYHRLLSTI+IVTVI VLG+
Subjt:  MRNPENATTQPPPCRSACRTTKACQAALKVEPQSSIGSLYHRLLSTISIVTVICVLGS
A0A5A7UBI0 Uncharacterized protein6.7e-2189.23Show/hide
Query:  RLCTRTSMRNPENATTQPPPCRSACRTTKACQAALKVEPQSSIGSLYHRLLSTISIVTVICVLGS
        +LCTRT MRNPENAT QPPP RSACRTTKAC AALKVEPQSSIGSLYHRLLSTI+IVTVI VLGS
Subjt:  RLCTRTSMRNPENATTQPPPCRSACRTTKACQAALKVEPQSSIGSLYHRLLSTISIVTVICVLGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTCCAAAATTTCATCAAAGTTTTTCCCTCCTTTCATTCCCCTCCCAAATTTCAGAAACCCACTTCTGAAAATCATTCCCCTTCCAAATTTCAAACTCCCTCCTCT
CATTGTCATCTCTCCCTATCTCTCTGATGCTCTTTTCTACTCACCATCTCTTTCTTTCACCATTTATCATGCCACGACCAATAGGTTGTGCACCCGTACATCGATGAGGA
ACCCCGAGAACGCTACCACCCAGCCACCCCCTTGCCGTTCAGCTTGTCGGACGACGAAAGCATGCCAAGCCGCACTGAAAGTTGAACCCCAAAGCTCCATTGGAAGTCTC
TACCACAGGTTGCTCTCGACGATTTCCATAGTGACTGTGATTTGTGTCCTTGGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTCCAAAATTTCATCAAAGTTTTTCCCTCCTTTCATTCCCCTCCCAAATTTCAGAAACCCACTTCTGAAAATCATTCCCCTTCCAAATTTCAAACTCCCTCCTCT
CATTGTCATCTCTCCCTATCTCTCTGATGCTCTTTTCTACTCACCATCTCTTTCTTTCACCATTTATCATGCCACGACCAATAGGTTGTGCACCCGTACATCGATGAGGA
ACCCCGAGAACGCTACCACCCAGCCACCCCCTTGCCGTTCAGCTTGTCGGACGACGAAAGCATGCCAAGCCGCACTGAAAGTTGAACCCCAAAGCTCCATTGGAAGTCTC
TACCACAGGTTGCTCTCGACGATTTCCATAGTGACTGTGATTTGTGTCCTTGGTAGTTGA
Protein sequenceShow/hide protein sequence
MCSKISSKFFPPFIPLPNFRNPLLKIIPLPNFKLPPLIVISPYLSDALFYSPSLSFTIYHATTNRLCTRTSMRNPENATTQPPPCRSACRTTKACQAALKVEPQSSIGSL
YHRLLSTISIVTVICVLGS