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IVF0012754 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012754
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr06:15317313..15317477
RNA-Seq ExpressionIVF0012754
SyntenyIVF0012754
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043535.1 hypothetical protein E6C27_scaffold335G00290 [Cucumis melo var. makuwa]1.72e-0465.91Show/hide
Query:  MAEEFDEEIERMS-LKQRLRPEELRLVDLVQPKKGKSKVGASRL
        +AEEF +EIERMS L+ RL P E RL ++VQPKK KSK G SRL
Subjt:  MAEEFDEEIERMS-LKQRLRPEELRLVDLVQPKKGKSKVGASRL

KAA0052868.1 stress response protein NST1-like [Cucumis melo var. makuwa]2.55e-0453.7Show/hide
Query:  MAEEFDEEIERMS-LKQRLRPEELRLVDLVQPKKGKSKVGASRLKVVQANVSLN
        + EEF +EI+RMS L+ RLRP+E  LV + QPKKGK+K G SR + VQ    L+
Subjt:  MAEEFDEEIERMS-LKQRLRPEELRLVDLVQPKKGKSKVGASRLKVVQANVSLN

KAA0060350.1 hypothetical protein E6C27_scaffold22G001410 [Cucumis melo var. makuwa]6.66e-1997.83Show/hide
Query:  MAEEFDEEIERMSLKQRLRPEELRLVDLVQPKKGKSKVGASRLKVV
        MAEEFDEEIERMSLKQRLRPEELRLVDLVQPKKGKSKVGASRLKV+
Subjt:  MAEEFDEEIERMSLKQRLRPEELRLVDLVQPKKGKSKVGASRLKVV

TYK11975.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]8.57e-0772.09Show/hide
Query:  MAEEFDEEIERMS-LKQRLRPEELRLVDLVQPKKGKSKVGASR
        +AEEF +EIERMS LK RLRPEEL L+ +VQPKKGK+K GA R
Subjt:  MAEEFDEEIERMS-LKQRLRPEELRLVDLVQPKKGKSKVGASR

TrEMBL top hitse value%identityAlignment
A0A5D3CKB6 Retrovirus-related Pol polyprotein from transposon 17.66.3e-0572.09Show/hide
Query:  MAEEFDEEIERMS-LKQRLRPEELRLVDLVQPKKGKSKVGASR
        +AEEF +EIERMS LK RLRPEEL L+ +VQPKKGK+K GA R
Subjt:  MAEEFDEEIERMS-LKQRLRPEELRLVDLVQPKKGKSKVGASR

A0A5D3DFD3 Uncharacterized protein2.2e-1397.83Show/hide
Query:  MAEEFDEEIERMSLKQRLRPEELRLVDLVQPKKGKSKVGASRLKVV
        MAEEFDEEIERMSLKQRLRPEELRLVDLVQPKKGKSKVGASRLKV+
Subjt:  MAEEFDEEIERMSLKQRLRPEELRLVDLVQPKKGKSKVGASRLKVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAGAGTTCGACGAAGAAATTGAGAGGATGAGTCTGAAACAAAGGTTGAGGCCTGAAGAACTTAGACTTGTTGATCTTGTGCAACCAAAGAAGGGCAAGAGCAA
AGTAGGGGCATCTAGACTTAAGGTTGTCCAAGCGAATGTGTCTTTAAACAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAGAGTTCGACGAAGAAATTGAGAGGATGAGTCTGAAACAAAGGTTGAGGCCTGAAGAACTTAGACTTGTTGATCTTGTGCAACCAAAGAAGGGCAAGAGCAA
AGTAGGGGCATCTAGACTTAAGGTTGTCCAAGCGAATGTGTCTTTAAACAACTAA
Protein sequenceShow/hide protein sequence
MAEEFDEEIERMSLKQRLRPEELRLVDLVQPKKGKSKVGASRLKVVQANVSLNN