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IVF0012763 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012763
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationtig00000607_ERROPOS641385+:200189..200536
RNA-Seq ExpressionIVF0012763
SyntenyIVF0012763
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035247.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.66e-1153.62Show/hide
Query:  SFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG
        S T+  SK   T  + + D+AFK KLV WL++NELKLSPKYT++ PSSS  PV++ D+N  +SGH P G
Subjt:  SFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.60e-1243.33Show/hide
Query:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG
        + K+ T S+    D       S     SK   T  + + D+AFK KLV WL++NELKLSPKYT++ PSSS+ PV++ D+N  ++GH P G
Subjt:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG

TYK01064.1 hypothetical protein E5676_scaffold264G00780 [Cucumis melo var. makuwa]3.85e-3565.74Show/hide
Query:  MDANNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLV
        MDANN NM +LEE N N+ +Q+K S   +  QVD   N+ T ERSK TST  DQD+DKAFKLKLVNWL+DNELKLS KY SEAPSSSTNP++LID+N LV
Subjt:  MDANNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLV

Query:  SGHRPWGK
        S H P G+
Subjt:  SGHRPWGK

TYK04225.1 hypothetical protein E5676_scaffold24967G00330 [Cucumis melo var. makuwa]2.39e-1343.81Show/hide
Query:  NNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERS-KITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSG
        NN      E EN N+ N +K    ++  +  G+ +  T     K TS   +Q++D+AFK KLVNWL++NELKLSPKYTS+  SSS  PV++ D+N  +S 
Subjt:  NNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERS-KITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSG

Query:  HRPWG
        H P G
Subjt:  HRPWG

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.72e-1143.33Show/hide
Query:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG
        + K+ T S+    D       S     SK   T  + + D+AFK KLV WL++NELKLSPKYT++ PSSS  PV++ D+N  ++GH P G
Subjt:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG

TrEMBL top hitse value%identityAlignment
A0A5A7US62 LINE-1 retrotransposable element ORF2 protein5.3e-0943.33Show/hide
Query:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG
        + K+ T S+    D       S     SK   T  + + D+AFK KLV WL++NELKLSPKYT++ PSSS  PV++ D+N  ++GH P G
Subjt:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein1.4e-0943.33Show/hide
Query:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG
        + K+ T S+    D       S     SK   T  + + D+AFK KLV WL++NELKLSPKYT++ PSSS+ PV++ D+N  ++GH P G
Subjt:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG

A0A5D3BPD1 Uncharacterized protein1.7e-2865.74Show/hide
Query:  MDANNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLV
        MDANN NM +LEE N N+ +Q+K S   +  QVD   N+ T ERSK TST  DQD+DKAFKLKLVNWL+DNELKLS KY SEAPSSSTNP++LID+N LV
Subjt:  MDANNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLV

Query:  SGHRPWGK
        S H P G+
Subjt:  SGHRPWGK

A0A5D3BYJ0 Uncharacterized protein7.3e-1144.23Show/hide
Query:  NNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGH
        NN      E EN N+ N +K    ++  Q      + T    K TS   +Q++D+AFK KLVNWL++NELKLSPKYTS+  SSS  PV++ D+N  +S H
Subjt:  NNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGH

Query:  RPWG
         P G
Subjt:  RPWG

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein5.3e-0943.33Show/hide
Query:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG
        + K+ T S+    D       S     SK   T  + + D+AFK KLV WL++NELKLSPKYT++ PSSS  PV++ D+N  ++GH P G
Subjt:  QVKSSTTSLPLQVD---GLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAAACAATTTCAACATGGCAGAACTAGAAGAGGAAAATCTCAATGAGCCCAATCAAGTTAAATCAAGTACAACAAGTCTACCTCTACAAGTTGACGGACTCGG
CAACAGTTTCACTAATGAAAGATCAAAAATCACAAGCACGGTCATTGATCAAGATGATGACAAGGCTTTCAAGTTGAAATTGGTGAATTGGCTAAGAGATAACGAGCTTA
AACTGTCTCCAAAATATACTTCAGAAGCCCCTAGCTCATCTACAAATCCTGTAGTGTTAATTGATGAAAACAAGCTTGTATCAGGCCATAGGCCTTGGGGGAAATGGGTA
ACACATGAAGGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAAACAATTTCAACATGGCAGAACTAGAAGAGGAAAATCTCAATGAGCCCAATCAAGTTAAATCAAGTACAACAAGTCTACCTCTACAAGTTGACGGACTCGG
CAACAGTTTCACTAATGAAAGATCAAAAATCACAAGCACGGTCATTGATCAAGATGATGACAAGGCTTTCAAGTTGAAATTGGTGAATTGGCTAAGAGATAACGAGCTTA
AACTGTCTCCAAAATATACTTCAGAAGCCCCTAGCTCATCTACAAATCCTGTAGTGTTAATTGATGAAAACAAGCTTGTATCAGGCCATAGGCCTTGGGGGAAATGGGTA
ACACATGAAGGTTCTTAG
Protein sequenceShow/hide protein sequence
MDANNFNMAELEEENLNEPNQVKSSTTSLPLQVDGLGNSFTNERSKITSTVIDQDDDKAFKLKLVNWLRDNELKLSPKYTSEAPSSSTNPVVLIDENKLVSGHRPWGKWV
THEGS