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IVF0012767 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012767
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr04:23213066..23213218
RNA-Seq ExpressionIVF0012767
SyntenyIVF0012767
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036983.1 retrotransposon protein [Cucumis melo var. makuwa]1.66e-1772Show/hide
Query:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW
        M NCDDIDDVDEGDS Y   T  EDIQYIET N+WSQW  ELAE MF +W
Subjt:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW

KAA0048337.1 retrotransposon protein [Cucumis melo var. makuwa]3.60e-2297.73Show/hide
Query:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAE
        MKNCDDIDDVDEGDSVYV ITITEDIQYIETTNEWSQWCDELAE
Subjt:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAE

KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]2.02e-1874Show/hide
Query:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW
        M  CDDIDDVDEGDS Y   T +EDI YIETTNEWSQW DELAE MF +W
Subjt:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW

KAA0062284.1 retrotransposon protein [Cucumis melo var. makuwa]1.12e-1774Show/hide
Query:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW
        M  CDDIDD DEGDS Y   T +EDIQYIETTNEWSQW D+LAE MF EW
Subjt:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW

TYK04228.1 retrotransposon protein [Cucumis melo var. makuwa]1.66e-1770Show/hide
Query:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW
        M  CD++DD DEGDS Y   T +EDIQYIETTNEWSQW D+LAE MF EW
Subjt:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW

TrEMBL top hitse value%identityAlignment
A0A1S4E0Z9 uncharacterized protein LOC1079914612.2e-1278.26Show/hide
Query:  DDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW
        DD+DDVDEGDS Y   T TEDI YIETTNEWSQWCDELAE MF +W
Subjt:  DDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW

A0A5A7U269 Retrotransposon protein4.3e-1697.73Show/hide
Query:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAE
        MKNCDDIDDVDEGDSVYV ITITEDIQYIETTNEWSQWCDELAE
Subjt:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAE

A0A5A7U3B3 Retrotransposon protein1.7e-1272Show/hide
Query:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW
        M  C+D+DDVDEGDS Y  IT +EDIQYIETTNEWSQW D+LAE MF +W
Subjt:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW

A0A5A7UNF3 Retrotransposon protein2.9e-1272Show/hide
Query:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW
        M NC+DIDDVDEGDS Y   T  +DIQYI+TTNEWSQW DELA+ MF EW
Subjt:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW

A0A5D3BQ46 Retrotransposon protein2.9e-1272Show/hide
Query:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW
        M  CDD+DDVD+GDS Y   T +EDIQYIETTNEWSQW DELAE MF +W
Subjt:  MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAATTGCGACGACATTGACGACGTGGACGAGGGAGACTCCGTGTACGTCAAGATCACCATTACAGAAGATATTCAGTACATTGAGACGACAAACGAGTGGTCTCA
GTGGTGCGACGAATTAGCTGAAGTAATGTTCAAAGAATGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAAATTGCGACGACATTGACGACGTGGACGAGGGAGACTCCGTGTACGTCAAGATCACCATTACAGAAGATATTCAGTACATTGAGACGACAAACGAGTGGTCTCA
GTGGTGCGACGAATTAGCTGAAGTAATGTTCAAAGAATGGTAG
Protein sequenceShow/hide protein sequence
MKNCDDIDDVDEGDSVYVKITITEDIQYIETTNEWSQWCDELAEVMFKEW