| GenBank top hits | e value | %identity | Alignment |
|---|
| ALM88234.1 RNA-dependent RNA polymerase 1b [Cucumis sativus] | 3.60e-132 | 78.57 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALI ANLRV+EYPD MDKADKVTY+S+N
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
Query: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
NIRSF YT E ARQ Y+PDMEV+GFEEYLD+A+YHKNNYDMRLGNLMHYHKIK E EL+SGGSLTSSLSFT KNEA+SIILAVKSL+KEARGWFNE
Subjt: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
Query: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
DLHYGH TN+YARASAWYFVTYHHTYWG F CVYDKLIRIK+RKIN RARY
Subjt: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
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| BAL63010.1 RNA-dependent RNA polymerase 1 [Cucumis sativus] | 3.12e-134 | 78.95 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALI ANLRV+EYPD MDKADKVTY+S+N
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
Query: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
NIRSF YT E ARQ Y+PDMEV+GFEEYLD+A+YHKNNYDMRLGNLMHYHKIK E EL+SGGSLTSSLSFT KNEA+SIILAVKSL+KEARGWFNE
Subjt: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
Query: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
DLHYGH TN+YARASAWYFVTYHHTYWG F WCVYDKLIRIK+RKIN RARY
Subjt: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
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| NP_001267682.1 RNA-dependent RNA polymerase 1-like [Cucumis sativus] | 3.12e-134 | 78.95 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALI ANLRV+EYPD MDKADKVTY+S+N
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
Query: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
NIRSF YT E ARQ Y+PDMEV+GFEEYLD+A+YHKNNYDMRLGNLMHYHKIK E EL+SGGSLTSSLSFT KNEA+SIILAVKSL+KEARGWFNE
Subjt: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
Query: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
DLHYGH TN+YARASAWYFVTYHHTYWG F WCVYDKLIRIK+RKIN RARY
Subjt: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
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| XP_038877934.1 RNA-dependent RNA polymerase 1-like isoform X1 [Benincasa hispida] | 2.22e-134 | 77.82 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
MEEVQEYFANYMVNDSLGIIANAHTAFADKEP+KAMSNPCI+LAKLFSIAVDFPKTG+PALI ANLRVQEYPD MDKADKVTY+S N
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
Query: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
NIRSF YT + AR+AY+PDMEV+GFEEYLD+A+YHKNNYDMRLGNLMHY+KIK E EL+SGGSLTSSLSFTKKNEA+SI +AVKSL+KEARGWFNE
Subjt: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
Query: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
N DLHYGHDTN+YARASAWYFVTYHHTYWG F WC+YDKLIRIKNRK NSRARY
Subjt: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
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| XP_038877939.1 RNA-dependent RNA polymerase 1-like isoform X2 [Benincasa hispida] | 2.74e-136 | 77.82 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
MEEVQEYFANYMVNDSLGIIANAHTAFADKEP+KAMSNPCI+LAKLFSIAVDFPKTG+PALI ANLRVQEYPD MDKADKVTY+S N
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
Query: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
NIRSF YT + AR+AY+PDMEV+GFEEYLD+A+YHKNNYDMRLGNLMHY+KIK E EL+SGGSLTSSLSFTKKNEA+SI +AVKSL+KEARGWFNE
Subjt: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
Query: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
N DLHYGHDTN+YARASAWYFVTYHHTYWG F WC+YDKLIRIKNRK NSRARY
Subjt: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0S1YCZ7 RNA-dependent RNA polymerase | 7.5e-111 | 78.57 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALI ANLRV+EYPD MDKADKVTY+S+N
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
Query: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
NIRSF YT E ARQ Y+PDMEV+GFEEYLD+A+YHKNNYDMRLGNLMHYHKIK E EL+SGGSLTSSLSFT KNEA+SIILAVKSL+KEARGWFNE
Subjt: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
Query: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
DLHYGH TN+YARASAWYFVTYHHTYWG F CVYDKLIRIK+RKIN RARY
Subjt: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
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| A0A5A7VH98 RNA-dependent RNA polymerase | 9.9e-103 | 96.04 | Show/hide |
Query: EVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERARQA
EVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQ SFTYTTERARQA
Subjt: EVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERARQA
Query: YNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNENEDLHYGHDTNMYARASAW
YNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNENEDLHYGHDTNMYARASA
Subjt: YNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNENEDLHYGHDTNMYARASAW
Query: YF
F
Subjt: YF
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| A0A6J1FR02 RNA-dependent RNA polymerase | 2.3e-99 | 71.97 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
MEEVQEYFANYMVNDSLGIIANAHTAFAD P+KAMS PCI+LAKLFSIAVDFPKTGVPALI A+LRVQ YPD MDK DK +Y+S N
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
Query: ---NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNEN
+I+S +T E ARQAY+PDMEVKGFEEYLD+ALYHKNNYDMRLGNLM Y+KIK E EL+SG SLT S SFTKKNEA+SII+AVKSL+KEARGWFNEN
Subjt: ---NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNEN
Query: EDLHYGHDTNMYARASAWYFVTYHHTYWG-----------CFSWCVYDKLIRIKNRKINSRARY
LH+GHD N YARASAWYFVTYH++YWG F WCVYDKLIRIK RKI +RAR+
Subjt: EDLHYGHDTNMYARASAWYFVTYHHTYWG-----------CFSWCVYDKLIRIKNRKINSRARY
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| E9NWK7 RNA-dependent RNA polymerase | 1.8e-112 | 78.95 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALI ANLRV+EYPD MDKADKVTY+S+N
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
Query: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
NIRSF YT E ARQ Y+PDMEV+GFEEYLD+A+YHKNNYDMRLGNLMHYHKIK E EL+SGGSLTSSLSFT KNEA+SIILAVKSL+KEARGWFNE
Subjt: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
Query: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
DLHYGH TN+YARASAWYFVTYHHTYWG F WCVYDKLIRIK+RKIN RARY
Subjt: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
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| H3K3Y9 RNA-dependent RNA polymerase | 1.8e-112 | 78.95 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALI ANLRV+EYPD MDKADKVTY+S+N
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDN-------------
Query: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
NIRSF YT E ARQ Y+PDMEV+GFEEYLD+A+YHKNNYDMRLGNLMHYHKIK E EL+SGGSLTSSLSFT KNEA+SIILAVKSL+KEARGWFNE
Subjt: ----NIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNE
Query: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
DLHYGH TN+YARASAWYFVTYHHTYWG F WCVYDKLIRIK+RKIN RARY
Subjt: NEDLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRARY
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O82504 RNA-dependent RNA polymerase 2 | 8.8e-32 | 34.26 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERA-
+EE+ ++F +YM++D+LG+I+ AH AD++P+KA S C++LA L S AVDF KTG PA + L+ +E+PD +++ +K TY S++ + +
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERA-
Query: -----------RQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNE-----AKSIILAVKSLQKEARGWFNE
AY+ +E GFE +++ A H++ Y +L +LM Y+ E E+L+G T + + N I L+VK L KEA GWF +
Subjt: -----------RQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNE-----AKSIILAVKSLQKEARGWFNE
Query: N-EDLHYGHDTNMYARASAWYFVTYHHTY------WGCFSWCVYDKLIRIK
+ ED + ASAWY+VTY+ + + F W V D L+ IK
Subjt: N-EDLHYGHDTNMYARASAWYFVTYHHTY------WGCFSWCVYDKLIRIK
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| Q0DXS3 Probable RNA-dependent RNA polymerase 1 | 1.6e-65 | 53.12 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSD-------NNIRSFT
+EEV+EYF NY+VN+SLG+IANAH FADKE KA S+PCI+LAKLFSIAVDFPKTGVPALI L V+EYPD M+K DKVTY+S I+ T
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSD-------NNIRSFT
Query: -----YTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNEN--ED
+T E AR++Y+ DM V G+E+Y+ A+ K+ YD +LGNLM ++ IK E E++SG L + +FTKK++A +I LAV+SL+KEAR F+E +D
Subjt: -----YTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNEN--ED
Query: LHYGHDTNMYARASAWYFVTYHHTYWGC------------FSWCVYDKLIRIKNRK
+GHD + A+ASAWY VTYH +WGC F WC+Y+KL+RIK R+
Subjt: LHYGHDTNMYARASAWYFVTYHHTYWGC------------FSWCVYDKLIRIKNRK
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| Q7XM31 Probable RNA-dependent RNA polymerase 2 | 3.2e-34 | 35.29 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTY-----------------
+EE+Q++F +YM+NDSLG I+ AH AD+ P KA S C+QLA L S+AVDF KTG PA + LR +EYPD M++ +K Y
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTY-----------------
Query: QSDNNIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNE-----AKSIILAVKSLQKEAR
+ + + + ++ + Y+PD+EV G +E+L A + Y+ +L LM+Y++ ++E E+L+G L + N+ I+ AV +L +EAR
Subjt: QSDNNIRSFTYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNE-----AKSIILAVKSLQKEAR
Query: GWFNENEDLHYGHDTNMYARASAWYFVTYH------HTYWGCFSWCVYDKLIRIK
GW L + + ASAWY VTYH +W F W D L+ IK
Subjt: GWFNENEDLHYGHDTNMYARASAWYFVTYH------HTYWGCFSWCVYDKLIRIK
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| Q9LQV2 RNA-dependent RNA polymerase 1 | 4.8e-70 | 53.99 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSF--------
+EEV+EYFANY+VNDSLGIIANAHTAFADKEP KA S+PCI+LAK FS AVDFPKTGV A+I +L V+EYPD M+K DK TY+S N I
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSF--------
Query: -------TYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNENE
++T + A ++Y+ DMEV GFEEY+D A Y K NYD +LGNLM Y+ IK E E+LSGG + S SFTK+ +A+SI AV++L+KE FN +E
Subjt: -------TYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNENE
Query: DLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRAR
+ + N A+ASAWY VTYH +YWG F+WCVYDKL+RIK + R R
Subjt: DLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRAR
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| Q9SG02 RNA-dependent RNA polymerase 6 | 2.6e-23 | 31.99 | Show/hide |
Query: EEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERARQ
+++ ++FA + N+ LG I NAH AD+ AM C+ LA+L + AVDFPKTG + +L+ + YPD M K D TY+S N I Y R ++
Subjt: EEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERARQ
Query: AYNPD-------------------MEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEA---KSIILAVKSLQKEARG
Y+ D +E+ GFE+ + A HK YD +L L+ +K++ E E+++ G + S +T K + + + + SL+KE R
Subjt: AYNPD-------------------MEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEA---KSIILAVKSLQKEARG
Query: WFNE----NEDLHYGHDTNMY-ARASAWYFVTYH-----------------HTYWGCFSWCVYDKLIRIKNR
F E +E+L +Y +ASAWY VTYH H F+W D L RIK R
Subjt: WFNE----NEDLHYGHDTNMY-ARASAWYFVTYH-----------------HTYWGCFSWCVYDKLIRIKNR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G14790.1 RNA-dependent RNA polymerase 1 | 3.4e-71 | 53.99 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSF--------
+EEV+EYFANY+VNDSLGIIANAHTAFADKEP KA S+PCI+LAK FS AVDFPKTGV A+I +L V+EYPD M+K DK TY+S N I
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSF--------
Query: -------TYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNENE
++T + A ++Y+ DMEV GFEEY+D A Y K NYD +LGNLM Y+ IK E E+LSGG + S SFTK+ +A+SI AV++L+KE FN +E
Subjt: -------TYTTERARQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEAKSIILAVKSLQKEARGWFNENE
Query: DLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRAR
+ + N A+ASAWY VTYH +YWG F+WCVYDKL+RIK + R R
Subjt: DLHYGHDTNMYARASAWYFVTYHHTYWG------------CFSWCVYDKLIRIKNRKINSRAR
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| AT3G49500.1 RNA-dependent RNA polymerase 6 | 1.8e-24 | 31.99 | Show/hide |
Query: EEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERARQ
+++ ++FA + N+ LG I NAH AD+ AM C+ LA+L + AVDFPKTG + +L+ + YPD M K D TY+S N I Y R ++
Subjt: EEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERARQ
Query: AYNPD-------------------MEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEA---KSIILAVKSLQKEARG
Y+ D +E+ GFE+ + A HK YD +L L+ +K++ E E+++ G + S +T K + + + + SL+KE R
Subjt: AYNPD-------------------MEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNEA---KSIILAVKSLQKEARG
Query: WFNE----NEDLHYGHDTNMY-ARASAWYFVTYH-----------------HTYWGCFSWCVYDKLIRIKNR
F E +E+L +Y +ASAWY VTYH H F+W D L RIK R
Subjt: WFNE----NEDLHYGHDTNMY-ARASAWYFVTYH-----------------HTYWGCFSWCVYDKLIRIKNR
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| AT4G11130.1 RNA-dependent RNA polymerase 2 | 6.2e-33 | 34.26 | Show/hide |
Query: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERA-
+EE+ ++F +YM++D+LG+I+ AH AD++P+KA S C++LA L S AVDF KTG PA + L+ +E+PD +++ +K TY S++ + +
Subjt: MEEVQEYFANYMVNDSLGIIANAHTAFADKEPKKAMSNPCIQLAKLFSIAVDFPKTGVPALILANLRVQEYPDLMDKADKVTYQSDNNIRSFTYTTERA-
Query: -----------RQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNE-----AKSIILAVKSLQKEARGWFNE
AY+ +E GFE +++ A H++ Y +L +LM Y+ E E+L+G T + + N I L+VK L KEA GWF +
Subjt: -----------RQAYNPDMEVKGFEEYLDNALYHKNNYDMRLGNLMHYHKIKIEVELLSGGSLTSSLSFTKKNE-----AKSIILAVKSLQKEARGWFNE
Query: N-EDLHYGHDTNMYARASAWYFVTYHHTY------WGCFSWCVYDKLIRIK
+ ED + ASAWY+VTY+ + + F W V D L+ IK
Subjt: N-EDLHYGHDTNMYARASAWYFVTYHHTY------WGCFSWCVYDKLIRIK
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