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IVF0012860 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012860
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionReverse transcriptase
Genome locationchr06:12840952..12841404
RNA-Seq ExpressionIVF0012860
SyntenyIVF0012860
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062402.1 uncharacterized protein E6C27_scaffold154G001950 [Cucumis melo var. makuwa]1.07e-5570.23Show/hide
Query:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI
        M SYVKFLKDILAKK R+ND +TVAL Q TS+VF+NGV +KM DPRSFM+ C IG MDLG  L D+  S  LMPL IFKKLE+GEVQPTHMR+QFA+RSI
Subjt:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI

Query:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVN
         KP+  IED+L KVDKFLF A FVIL+Y  N
Subjt:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVN

KAA0066938.1 uncharacterized protein E6C27_scaffold550G00700 [Cucumis melo var. makuwa]2.04e-79100Show/hide
Query:  MNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSIAKPEGKIEDVLVKVDKF
        MNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSIAKPEGKIEDVLVKVDKF
Subjt:  MNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSIAKPEGKIEDVLVKVDKF

Query:  LFSAGFVILDYRVNWE
        LFSAGFVILDYRVNWE
Subjt:  LFSAGFVILDYRVNWE

XP_008447648.1 PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo]1.68e-5667.88Show/hide
Query:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI
        M SY KFL DILAKKRR+ND +T+AL Q TS+++KNGV +KM  P SF V C I GMDLG  LCD+G S  LMPL IFKKL+I EVQPTHMR Q A+RSI
Subjt:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI

Query:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQII
          P+GKIEDVLVKVDKFLF A F+ILDY  + EV II
Subjt:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQII

XP_008455671.1 PREDICTED: uncharacterized protein LOC103495785 [Cucumis melo]8.12e-5871.22Show/hide
Query:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI
        M SY+KFLK ILAKKR++ND ETVALTQTTS+VFKNGV KKM D  SF+V C IGGMDLGRAL  +G S  LM L IFKKL I EVQ +HMR+ FA+RS 
Subjt:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI

Query:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQIIFG
        AK E KIEDVLVKVDKFLFSA FVILDY  + +V II G
Subjt:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQIIFG

XP_016902557.1 PREDICTED: uncharacterized protein LOC107991723 [Cucumis melo]1.82e-5770.99Show/hide
Query:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI
        M SYVKFLKDILAKK R+ND +TVAL Q TS+VF+NGV +KM DPRSFM+ C IG MDLG  L D+G S  LMPL IFKKLE+GEVQPTHMR+QFA+RSI
Subjt:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI

Query:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVN
         KP+  IED+L KVDKFLF A FVIL+Y  N
Subjt:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVN

TrEMBL top hitse value%identityAlignment
A0A1S3BHX3 uncharacterized protein LOC1034900557.3e-4367.88Show/hide
Query:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI
        M SY KFL DILAKKRR+ND +T+AL Q TS+++KNGV +KM  P SF V C I GMDLG  LCD+G S  LMPL IFKKL+I EVQPTHMR Q A+RSI
Subjt:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI

Query:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQII
          P+GKIEDVLVKVDKFLF A F+ILDY  + EV II
Subjt:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQII

A0A1S3C108 uncharacterized protein LOC1034957852.5e-4371.22Show/hide
Query:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI
        M SY+KFLK ILAKKR++ND ETVALTQTTS+VFKNGV KKM D  SF+V C IGGMDLGRAL  +G S  LM L IFKKL I EVQ +HMR+ FA+RS 
Subjt:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI

Query:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQIIFG
        AK E KIEDVLVKVDKFLFSA FVILDY  + +V II G
Subjt:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQIIFG

A0A1S4E2V6 uncharacterized protein LOC1079917231.1e-4370.99Show/hide
Query:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI
        M SYVKFLKDILAKK R+ND +TVAL Q TS+VF+NGV +KM DPRSFM+ C IG MDLG  L D+G S  LMPL IFKKLE+GEVQPTHMR+QFA+RSI
Subjt:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI

Query:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVN
         KP+  IED+L KVDKFLF A FVIL+Y  N
Subjt:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVN

A0A5D3BDT2 RT_RNaseH domain-containing protein7.3e-4367.88Show/hide
Query:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI
        M SY KFL DILAKKRR+ND +T+AL Q TS+++KNGV +KM  P SF V C I GMDLG  LCD+G S  LMPL IFKKL+I EVQPTHMR Q A+RSI
Subjt:  MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSI

Query:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQII
          P+GKIEDVLVKVDKFLF A F+ILDY  + EV II
Subjt:  AKPEGKIEDVLVKVDKFLFSAGFVILDYRVNWEVQII

A0A5D3E346 Uncharacterized protein2.9e-60100Show/hide
Query:  MNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSIAKPEGKIEDVLVKVDKF
        MNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSIAKPEGKIEDVLVKVDKF
Subjt:  MNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSIAKPEGKIEDVLVKVDKF

Query:  LFSAGFVILDYRVNWE
        LFSAGFVILDYRVNWE
Subjt:  LFSAGFVILDYRVNWE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCTATGTAAAGTTCTTGAAAGATATCTTGGCAAAGAAAAGAAGGATGAATGATTGCGAAACAGTGGCTCTAACGCAAACAACAAGCAATGTCTTTAAAAATGG
GGTAGCCAAGAAAATGAAAGATCCTAGAAGCTTCATGGTGCATTGCTTGATAGGCGGGATGGATTTAGGTCGTGCTTTATGCGACATTGGGGTAAGCACTTATTTGATGC
CTCTATGTATATTTAAGAAGTTGGAGATAGGGGAGGTACAACCAACTCACATGAGGGTCCAATTTGCTAATAGATCCATTGCCAAGCCTGAGGGCAAAATTGAAGACGTT
TTGGTAAAGGTGGATAAATTTCTATTTTCTGCAGGCTTCGTTATTCTTGATTACAGAGTTAATTGGGAGGTTCAAATCATCTTCGGGTGGCCATTATCCTGTCAATTGGT
CGTGCCCTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCTATGTAAAGTTCTTGAAAGATATCTTGGCAAAGAAAAGAAGGATGAATGATTGCGAAACAGTGGCTCTAACGCAAACAACAAGCAATGTCTTTAAAAATGG
GGTAGCCAAGAAAATGAAAGATCCTAGAAGCTTCATGGTGCATTGCTTGATAGGCGGGATGGATTTAGGTCGTGCTTTATGCGACATTGGGGTAAGCACTTATTTGATGC
CTCTATGTATATTTAAGAAGTTGGAGATAGGGGAGGTACAACCAACTCACATGAGGGTCCAATTTGCTAATAGATCCATTGCCAAGCCTGAGGGCAAAATTGAAGACGTT
TTGGTAAAGGTGGATAAATTTCTATTTTCTGCAGGCTTCGTTATTCTTGATTACAGAGTTAATTGGGAGGTTCAAATCATCTTCGGGTGGCCATTATCCTGTCAATTGGT
CGTGCCCTCATAG
Protein sequenceShow/hide protein sequence
MSSYVKFLKDILAKKRRMNDCETVALTQTTSNVFKNGVAKKMKDPRSFMVHCLIGGMDLGRALCDIGVSTYLMPLCIFKKLEIGEVQPTHMRVQFANRSIAKPEGKIEDV
LVKVDKFLFSAGFVILDYRVNWEVQIIFGWPLSCQLVVPS