; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0012886 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012886
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr10:11448781..11449104
RNA-Seq ExpressionIVF0012886
SyntenyIVF0012886
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038053.1 uncharacterized protein E6C27_scaffold36G002560 [Cucumis melo var. makuwa]5.18e-2663.95Show/hide
Query:  KFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPN
        +FP++ E  +AI+SL WDYCEEEV  +LF  EEFF+EED  YI KEVN+VSG R FE+ D QTKG +K K SIEE P+LELK LPN
Subjt:  KFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPN

KAA0040570.1 uncharacterized protein E6C27_scaffold262G001400 [Cucumis melo var. makuwa]3.90e-2758.42Show/hide
Query:  FPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTLCL
        FP +VE+CNAI+ LGWDYCEEE   +LF  +EF +E+  YYI KEVN VSG  KFE+ D QTKG  K ++SIEE P+LELKPLPN+ K  Y+    TL +
Subjt:  FPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTLCL

Query:  S
        S
Subjt:  S

KAA0040851.1 hypothetical protein E6C27_scaffold333G00760 [Cucumis melo var. makuwa]7.59e-3260.75Show/hide
Query:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNKNMYIWRRTTLC
        MKF ++V+N   I+SLGWDY EEEVL +LF  +EFF+EED YY  +EV+VVS  RKFE  D QTKG++KNK SIEE PELELKPL N+     + R TLC
Subjt:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNKNMYIWRRTTLC

Query:  LSSSSPN
         SSS  N
Subjt:  LSSSSPN

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]1.95e-2858.25Show/hide
Query:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTL
        MKFP+N    NAI+SLGWDYC+EE   +LF  EEFF+EED  YI +EVNV+ G  KFE+ D +TKG +K KSSIEE PE+ELKPLPN+ K  Y+    TL
Subjt:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTL

Query:  CLS
         ++
Subjt:  CLS

TYK25882.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]5.52e-5792Show/hide
Query:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNKN-MYIWRRTTL
        MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNK  +Y+    TL
Subjt:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNKN-MYIWRRTTL

TrEMBL top hitse value%identityAlignment
A0A5A7TGQ9 Uncharacterized protein1.2e-2360.75Show/hide
Query:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNKNMYIWRRTTLC
        MKF ++V+N   I+SLGWDY EEEVL +LF  +EFF+EED YY  +EV+VVS  RKFE  D QTKG++KNK SIEE PELELKPL N+     + R TLC
Subjt:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNKNMYIWRRTTLC

Query:  LSSSSPN
         SSS  N
Subjt:  LSSSSPN

A0A5A7UE99 Uncharacterized protein5.0e-2258.25Show/hide
Query:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTL
        MKFP+N    NAI+SLGWDYC+EE   +LF  EEFF+EED  YI +EVNV+ G  KFE+ D +TKG +K KSSIEE PE+ELKPLPN+ K  Y+    TL
Subjt:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTL

Query:  CLS
         ++
Subjt:  CLS

A0A5A7UF79 Uncharacterized protein2.1e-2055.77Show/hide
Query:  FPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTLCL
        FP++ ENCN I+ LGW+Y E+E   +LF  EEFF+E+D  YI KEVNVVS  +KFE+ D Q KG +K K SIEE PELELK LPN+ K +Y+    TL +
Subjt:  FPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTLCL

Query:  SSSS
        S S+
Subjt:  SSSS

A0A5D3C0Z2 Integrase_H2C2 domain-containing protein2.3e-2258.42Show/hide
Query:  FPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTLCL
        FP +VE+CNAI+ LGWDYCEEE   +LF  +EF +E+  YYI KEVN VSG  KFE+ D QTKG  K ++SIEE P+LELKPLPN+ K  Y+    TL +
Subjt:  FPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNN-KNMYIWRRTTLCL

Query:  S
        S
Subjt:  S

A0A5D3DQS7 Transposon Ty3-G Gag-Pol polyprotein6.8e-4392Show/hide
Query:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNKN-MYIWRRTTL
        MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNK  +Y+    TL
Subjt:  MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNKN-MYIWRRTTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTCCCTCTAATGTTGAAAACTGCAACGCGATAAAATCCCTTGGGTGGGATTATTGCGAAGAAGAAGTGTTAACTAAACTATTCATCCCTGAAGAATTCTTTAA
AGAAGAGGACTCTTATTACATCCAGAAAGAAGTGAACGTTGTGTCTGGCACAAGAAAATTTGAAGCTTCGGATCAACAAACCAAAGGCAATAGGAAGAATAAGTCATCAA
TTGAAGAGTCACCGGAATTAGAGCTCAAGCCATTGCCCAACAACAAAAATATGTATATTTGGAGGAGAACGACACTCTGTCTGTCATCGTCTTCACCCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTCCCTCTAATGTTGAAAACTGCAACGCGATAAAATCCCTTGGGTGGGATTATTGCGAAGAAGAAGTGTTAACTAAACTATTCATCCCTGAAGAATTCTTTAA
AGAAGAGGACTCTTATTACATCCAGAAAGAAGTGAACGTTGTGTCTGGCACAAGAAAATTTGAAGCTTCGGATCAACAAACCAAAGGCAATAGGAAGAATAAGTCATCAA
TTGAAGAGTCACCGGAATTAGAGCTCAAGCCATTGCCCAACAACAAAAATATGTATATTTGGAGGAGAACGACACTCTGTCTGTCATCGTCTTCACCCAATTGA
Protein sequenceShow/hide protein sequence
MKFPSNVENCNAIKSLGWDYCEEEVLTKLFIPEEFFKEEDSYYIQKEVNVVSGTRKFEASDQQTKGNRKNKSSIEESPELELKPLPNNKNMYIWRRTTLCLSSSSPN