; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0012928 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012928
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionNuclear transcription factor Y subunit B-3
Genome locationchr11:13119194..13119733
RNA-Seq ExpressionIVF0012928
SyntenyIVF0012928
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060802.1 uncharacterized protein E6C27_scaffold137G00220 [Cucumis melo var. makuwa]9.72e-11696.24Show/hide
Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEE-------DQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDD
        MSMLYFSISKRSSLPIQKFVQEQEEEEEE       DQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDD
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEE-------DQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDD

Query:  GSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        GSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  GSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

TYK11971.1 uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa]1.37e-118100Show/hide
Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE
        MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE

Query:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_008464163.1 PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]8.82e-118100Show/hide
Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE
        MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE

Query:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_011656887.2 uncharacterized protein LOC105435780 [Cucumis sativus]1.77e-10391.11Show/hide
Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEE-DQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDE
        MSMLYFSISKR+SLPI+KFVQE+EEEEEE DQK+LTFFSDHLKSSSASAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDE
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEE-DQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDE

Query:  ESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ESLIEIALPTGHYVSRKFDDVDEDED  D  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_038902685.1 uncharacterized protein LOC120089322 [Benincasa hispida]6.14e-10291.11Show/hide
Query:  MSMLYFSISKRSSLPIQKFVQE-QEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDE
        MSMLYFSISKR+SLPIQKFVQ+ QEEEEEEDQK+LTFFSDHLKSSS SAPTT DLLSESECADDNFTTTEESEVEWPYFDHR YK  +P RSDDGSISDE
Subjt:  MSMLYFSISKRSSLPIQKFVQE-QEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDE

Query:  ESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ESLIEIALPTGHYVS KFDDVD DEDED   FRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

TrEMBL top hitse value%identityAlignment
A0A0A0KCP7 Uncharacterized protein2.0e-7991.06Show/hide
Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE
        MSMLYFSISKR+SLPI+KFV  QEEEEEEDQK+LTFFSDHLKSSSASAPT  DLLSESECADDNFTTTEESEVEWPYFDHRF K R+PHRSDDGSISDEE
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE

Query:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVSRKFDDV  DEDEDD  FRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A1S3CMD0 uncharacterized protein LOC1035021113.8e-91100Show/hide
Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE
        MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE

Query:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5A7UY43 Uncharacterized protein4.7e-8996.24Show/hide
Query:  MSMLYFSISKRSSLPIQKFVQEQ-------EEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDD
        MSMLYFSISKRSSLPIQKFVQEQ       EEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDD
Subjt:  MSMLYFSISKRSSLPIQKFVQEQ-------EEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDD

Query:  GSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        GSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  GSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5D3CJH9 Uncharacterized protein3.8e-91100Show/hide
Query:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE
        MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE
Subjt:  MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEE

Query:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A6J1CG35 uncharacterized protein LOC1110112031.6e-5776.88Show/hide
Query:  MSMLYFSISKRSSL------PIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDG
        MSMLYF+ISKR+SL      PI+KFV   EEEEEE + E++F SD  K SSASAP T DLLSESECADDNFTTTEESEVEWP+ D     A +P RS DG
Subjt:  MSMLYFSISKRSSL------PIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDG

Query:  SISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQK-KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SISDEESLIEIALPTGHYVS KFDD +EDEDEDD  F  QKLSDFQK KNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQK-KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04480.1 unknown protein1.8e-1647.87Show/hide
Query:  RSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ++    DDG+I D+ESLIE++LP+GHY+   ++         +  + + K+ DF+   L ++L EIND  EE+NLIEIDIS+GSIKYSRFEI+A
Subjt:  RSPHRSDDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

AT5G35870.1 unknown protein7.1e-1346.59Show/hide
Query:  DDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        DDG+I DEESLIE++LP+GHY+   +  +   +D+      Y  + DF+   L+++ AE     E++NLIEIDIS+GSIK SRF+I+A
Subjt:  DDGSISDEESLIEIALPTGHYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATGCTTTATTTCTCAATCTCCAAAAGAAGTTCACTACCTATTCAAAAATTTGTACAAGAACAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGACCTTTTT
TTCTGATCACTTGAAATCGTCGTCGGCGTCAGCTCCAACGACCAGAGACTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGG
AGTGGCCGTACTTTGACCATCGGTTCTATAAAGCCAGAAGCCCGCATCGGTCTGATGACGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACCGGA
CATTACGTCAGCCGTAAGTTTGATGACGTCGACGAGGACGAGGACGAGGACGACACGCCGTTTCGTTACCAGAAACTGTCGGATTTTCAAAAGAAGAATCTTGTGGAGGT
GTTGGCTGAAATTAACGACATCAATGAGGAGGAGAATTTGATCGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTATGCTTTATTTCTCAATCTCCAAAAGAAGTTCACTACCTATTCAAAAATTTGTACAAGAACAAGAAGAAGAAGAAGAAGAAGATCAGAAAGAACTGACCTTTTT
TTCTGATCACTTGAAATCGTCGTCGGCGTCAGCTCCAACGACCAGAGACTTGCTGTCGGAAAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGG
AGTGGCCGTACTTTGACCATCGGTTCTATAAAGCCAGAAGCCCGCATCGGTCTGATGACGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACCGGA
CATTACGTCAGCCGTAAGTTTGATGACGTCGACGAGGACGAGGACGAGGACGACACGCCGTTTCGTTACCAGAAACTGTCGGATTTTCAAAAGAAGAATCTTGTGGAGGT
GTTGGCTGAAATTAACGACATCAATGAGGAGGAGAATTTGATCGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA
Protein sequenceShow/hide protein sequence
MSMLYFSISKRSSLPIQKFVQEQEEEEEEDQKELTFFSDHLKSSSASAPTTRDLLSESECADDNFTTTEESEVEWPYFDHRFYKARSPHRSDDGSISDEESLIEIALPTG
HYVSRKFDDVDEDEDEDDTPFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA