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IVF0012973 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0012973
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr07:5628261..5628428
RNA-Seq ExpressionIVF0012973
SyntenyIVF0012973
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038851.1 retrotransposon protein [Cucumis melo var. makuwa]1.30e-3198.18Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLA SMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
KAA0041029.1 retrotransposon protein [Cucumis melo var. makuwa]2.26e-3098.18Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQW DDLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
KAA0043059.1 retrotransposon protein [Cucumis melo var. makuwa]5.31e-3196.36Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDV+DEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
KAA0047892.1 retrotransposon protein [Cucumis melo var. makuwa]3.60e-29100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
KAA0065284.1 retrotransposon protein [Cucumis melo var. makuwa]3.03e-2996.36Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRD+LAASMFTDWQF NA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
TrEMBL top hitse value%identityAlignment
A0A5A7TWL4 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
A0A5A7TXM1 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
A0A5A7U2E3 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
A0A5A7UST8 Retrotransposon protein3.1e-23100Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
A0A5A7V6J9 Retrotransposon protein8.9e-2398.18Show/hide
Query:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
        MTYCDDVEDEDEGDSTYATTTASEDIQYI+TTNEWSQWRDDLAASMFTDWQFRNA
Subjt:  MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGCATCGATGTTCACCGATTGGCAGTTTCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTGAGGACGAGGACGAGGGGGACTCCACGTACGCGACGACCACCGCTTCAGAAGACATTCAGTACATTGAGACAACAAACGAGTGGTCTCA
GTGGCGCGACGACCTAGCCGCATCGATGTTCACCGATTGGCAGTTTCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVEDEDEGDSTYATTTASEDIQYIETTNEWSQWRDDLAASMFTDWQFRNA