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IVF0013014 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013014
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr01:6640344..6640631
RNA-Seq ExpressionIVF0013014
SyntenyIVF0013014
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
GO:0047938 - glucose-6-phosphate 1-epimerase activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048512.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]3.27e-3181.01Show/hide
Query:  MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG
        MPHTETQE APEIEE VKTVLSKYQD FD PEELP KRMI+ +IHLKA TD VNVRPY YGFQQK +M+KL+NEMLSSG
Subjt:  MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG

KAA0058177.1 ty3-gypsy retroelement transposase [Cucumis melo var. makuwa]2.61e-3880.22Show/hide
Query:  TETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHTQAQYY
        TE QEE PE EEAVKTVLSKYQD FD PEELP KR IEHHIHLKA  DPVNV  YRYG QQK EM+KLV+EMLSSGVIRP TS HTQA+YY
Subjt:  TETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHTQAQYY

KAA0061303.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]5.39e-46100Show/hide
Query:  MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG
        MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG
Subjt:  MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG

TYK03866.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.28e-2671.23Show/hide
Query:  VKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHT
        + +V+ +YQD FD PE+LP +R IEHHIHLK  TDP+NVRPYRYGFQQK EM+KLV EML+SGVIRPSTSP++
Subjt:  VKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHT

TYK29764.1 peroxidase 64 [Cucumis melo var. makuwa]7.44e-2763.64Show/hide
Query:  IEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHT
        IEE++  VL K+ D F+ PE+LP +R IEHHIHLK +T+P+NVRP RY +QQK+EM K V EMLSSGVIRPS SP++
Subjt:  IEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHT

TrEMBL top hitse value%identityAlignment
A0A5A7TY98 Retrovirus-related Pol polyprotein from transposon 297 family3.9e-2681.01Show/hide
Query:  MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG
        MPHTETQE APEIEE VKTVLSKYQD FD PEELP KRMI+ +IHLKA TD VNVRPY YGFQQK +M+KL+NEMLSSG
Subjt:  MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG

A0A5A7UTV9 Ty3-gypsy retroelement transposase5.8e-3080.22Show/hide
Query:  TETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHTQAQYY
        TE QEE PE EEAVKTVLSKYQD FD PEELP KR IEHHIHLKA  DPVNV  YRYG QQK EM+KLV+EMLSSGVIRP TS HTQA+YY
Subjt:  TETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHTQAQYY

A0A5A7UZB6 Transposon Tf2-1 polyprotein isoform X12.4e-36100Show/hide
Query:  MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG
        MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG
Subjt:  MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSG

A0A5D3C091 Ty3/gypsy retrotransposon protein2.6e-2271.23Show/hide
Query:  VKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHT
        + +V+ +YQD FD PE+LP +R IEHHIHLK  TDP+NVRPYRYGFQQK EM+KLV EML+SGVIRPSTSP++
Subjt:  VKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHT

A0A5D3CXQ2 Ty3/gypsy retrotransposon protein1.3e-2168.42Show/hide
Query:  EIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSP
        E++ A+ TVL ++QD F+ PE+LP +R IEH IHLK  TDP+NVRPYRYGFQQK+EM+KLV EML SGVIRPS SP
Subjt:  EIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACATACAGAGACTCAAGAAGAAGCACCCGAAATAGAGGAAGCTGTCAAAACAGTGTTAAGTAAATATCAAGATGCTTTCGACCGGCCTGAAGAACTACCCCTAAA
GAGGATGATTGAACATCATATACATCTGAAGGCAGAAACCGATCCTGTAAATGTGAGACCCTACAGATATGGATTTCAACAGAAAGACGAGATGAAGAAGTTAGTCAATG
AGATGCTTTCATCTGGGGTGATTCGTCCTAGCACAAGCCCACATACTCAAGCCCAGTACTATTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCACATACAGAGACTCAAGAAGAAGCACCCGAAATAGAGGAAGCTGTCAAAACAGTGTTAAGTAAATATCAAGATGCTTTCGACCGGCCTGAAGAACTACCCCTAAA
GAGGATGATTGAACATCATATACATCTGAAGGCAGAAACCGATCCTGTAAATGTGAGACCCTACAGATATGGATTTCAACAGAAAGACGAGATGAAGAAGTTAGTCAATG
AGATGCTTTCATCTGGGGTGATTCGTCCTAGCACAAGCCCACATACTCAAGCCCAGTACTATTCGTAA
Protein sequenceShow/hide protein sequence
MPHTETQEEAPEIEEAVKTVLSKYQDAFDRPEELPLKRMIEHHIHLKAETDPVNVRPYRYGFQQKDEMKKLVNEMLSSGVIRPSTSPHTQAQYYS