; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013052 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013052
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibonuclease H
Genome locationchr05:7146694..7147654
RNA-Seq ExpressionIVF0013052
SyntenyIVF0013052
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR001584 - Integrase, catalytic core
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033220.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]1.98e-18084.62Show/hide
Query:  MAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRME
        MAEYEACSMGVRMAYEMKVKQLRVLGDSLL VHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVP ESNQVADALATLSAMFNVAYSEEVQPIRME
Subjt:  MAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRME

Query:  KYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QKSLEEIHEGVCGTHANGHMMAR
        KYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYP G SENSKRT+RRLAM                           +KSLEEIHEGVCGTHANGHMMAR
Subjt:  KYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QKSLEEIHEGVCGTHANGHMMAR

Query:  QILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKFI
        QILRAGYFWLTMESDCIKYVRRCHK           +SPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAV+KFI
Subjt:  QILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKFI

KAA0037720.1 putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]2.25e-13473.78Show/hide
Query:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL
        MSPDGKWYPLTAKLYFD TNNMA+YEA S+GVR+AYEMK+K LRVLGDSLLVVHQLN EWETRDAKLIPYNDYI T+ QTFDS+TFEH PRE NQV DAL
Subjt:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL

Query:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK
        ATLS MFNVAYSEEVQPIRMEKYKTPSYCMSLER+PDGKPWYHDIKHYIAYREYP GAS+NSKRTI+RLAM                           + 
Subjt:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK

Query:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAP
         LEE HEGVCGTHANG+MMARQ+LR+GYFWLTME DCIK+ RRCHK           +S LHVLTAP
Subjt:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAP

KAA0046609.1 hypothetical protein E6C27_scaffold114G001550 [Cucumis melo var. makuwa]4.50e-18784.64Show/hide
Query:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL
        MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVK+LRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTF SITFEHVPRESNQVADAL
Subjt:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL

Query:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK
        AT SAMFNVAYSEEVQPIRMEKYKTPSYCMSLER+PDGK WYHDIKHYIAYREYPPGASENSKRTIRRLAM                           + 
Subjt:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK

Query:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT
         LEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK           +SPLHVLTAPWPFSMWGLDVIGPIE KASNGHRFILVAIDYFT
Subjt:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT

Query:  KWVEAASYKSVTKQAVVKF
        KWVEAASYKSVTKQAVVK+
Subjt:  KWVEAASYKSVTKQAVVKF

KAA0049671.1 uncharacterized protein E6C27_scaffold76G00060 [Cucumis melo var. makuwa]9.83e-17580.94Show/hide
Query:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL
        MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMK+K+LRVLGDS+LVVHQLNGEWETRDAKLIPYNDYI TIAQTF+SITFEHVPRESNQV DAL
Subjt:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL

Query:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK
        ATLSAMFNVAYSE VQPIRMEKYKTPSYCMSLER+P+GK WYHDIKHYIAYREYPPGASENSKRTIRRLAM                           +K
Subjt:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK

Query:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKSS-----------PLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT
         LEEIHEGV  TH N HMMA Q+LRAGYFWL MES+CIKYVRRC+K             PLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT
Subjt:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHKSS-----------PLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT

Query:  KWVEAASYKSVTKQAVVKFI
        KWVEAASYKSVTKQAVVKFI
Subjt:  KWVEAASYKSVTKQAVVKFI

XP_022147189.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia]3.96e-13262.19Show/hide
Query:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL
        +SP G+ YPL A+L FDC +NMAEYEACSMGV+ A +MKVK+L+V GDS+LV+HQL GEWETRD KL+PY  +I  ++Q FD I+F+++PRE+NQVADAL
Subjt:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL

Query:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK
        ATL+ MFN+  +E+V+PI++ +   P+ CMS+E +PDGKPW+HDIK YI  +EYPP ASEN KRT+R+LA+                            +
Subjt:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK

Query:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT
         +EEIHEGVCGTHANGHMMARQILRAGY+WLT+E+DCIKY R+CHK           +S LH LTAPWPFSMWG+DVIGPIEPKASNGH+FILVAIDYFT
Subjt:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT

Query:  KWVEAASYKSVTKQAVVKFI
        KWVEAASY+ VTK  VVKFI
Subjt:  KWVEAASYKSVTKQAVVKFI

TrEMBL top hitse value%identityAlignment
A0A5A7SQN1 Ribonuclease H1.9e-14084.62Show/hide
Query:  MAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRME
        MAEYEACSMGVRMAYEMKVKQLRVLGDSLL VHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVP ESNQVADALATLSAMFNVAYSEEVQPIRME
Subjt:  MAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYSEEVQPIRME

Query:  KYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QKSLEEIHEGVCGTHANGHMMAR
        KYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYP G SENSKRT+RRLAM                           +KSLEEIHEGVCGTHANGHMMAR
Subjt:  KYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QKSLEEIHEGVCGTHANGHMMAR

Query:  QILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKFI
        QILRAGYFWLTMESDCIKYVRRCHK           +SPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAV+KFI
Subjt:  QILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKFI

A0A5A7TZF3 Ribonuclease H6.2e-15284.64Show/hide
Query:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL
        MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVK+LRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTF SITFEHVPRESNQVADAL
Subjt:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL

Query:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK
        AT SAMFNVAYSEEVQPIRMEKYKTPSYCMSLER+PDGK WYHDIKHYIAYREYPPGASENSKRTIRRLAM                           + 
Subjt:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK

Query:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT
         LEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK           +SPLHVLTAPWPFSMWGLDVIGPIE KASNGHRFILVAIDYFT
Subjt:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT

Query:  KWVEAASYKSVTKQAVVKF
        KWVEAASYKSVTKQAVVK+
Subjt:  KWVEAASYKSVTKQAVVKF

A0A5A7U7X5 Ribonuclease H1.5e-14580.94Show/hide
Query:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL
        MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMK+K+LRVLGDS+LVVHQLNGEWETRDAKLIPYNDYI TIAQTF+SITFEHVPRESNQV DAL
Subjt:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL

Query:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAM--------------------------NQK
        ATLSAMFNVAYSE VQPIRMEKYKTPSYCMSLER+P+GK WYHDIKHYIAYREYPPGASENSKRTIRRLAM                           +K
Subjt:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAM--------------------------NQK

Query:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT
         LEEIHEGV  TH N HMMA Q+LRAGYFWL MES+CIKYVRRC+K           + PLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT
Subjt:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT

Query:  KWVEAASYKSVTKQAVVKFI
        KWVEAASYKSVTKQAVVKFI
Subjt:  KWVEAASYKSVTKQAVVKFI

A0A6J1D099 Ribonuclease H1.6e-11562.19Show/hide
Query:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL
        +SP G+ YPL A+L FDC +NMAEYEACSMGV+ A +MKVK+L+V GDS+LV+HQL GEWETRD KL+PY  +I  ++Q FD I+F+++PRE+NQVADAL
Subjt:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL

Query:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK
        ATL+ MFN+  +E+V+PI++ +   P+ CMS+E +PDGKPW+HDIK YI  +EYPP ASEN KRT+R+LA+                            +
Subjt:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK

Query:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT
         +EEIHEGVCGTHANGHMMARQILRAGY+WLT+E+DCIKY R+CHK           +S LH LTAPWPFSMWG+DVIGPIEPKASNGH+FILVAIDYFT
Subjt:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT

Query:  KWVEAASYKSVTKQAVVKFI
        KWVEAASY+ VTK  VVKFI
Subjt:  KWVEAASYKSVTKQAVVKFI

A0A6J1DZ90 Ribonuclease H3.0e-11461.88Show/hide
Query:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL
        +SP G+ YPLT KL FDCT+NMAEYEACSMGV+ A +MKVK+ +V GDS LV+HQL GEWETRD KL+PY   I  ++Q FD I+F+++PRE+NQVADAL
Subjt:  MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADAL

Query:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK
        ATL+ MFN+  +E+V+PI++ +   P+ CMS+E +PDG PW+HDIK YI  +EY P ASEN KRT+R+LAM                            +
Subjt:  ATLSAMFNVAYSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMN--------------------------QK

Query:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT
         +EE+HEGVCGTHANGHMMARQILRAGY+WLT+E+DCIKY R+CHK           +S LH LTAPWPFSMWG+DVIGPIEPKAS+GHRFILVAIDYFT
Subjt:  SLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK-----------SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFT

Query:  KWVEAASYKSVTKQAVVKFI
        KWVEAASY+ VTK  VVKFI
Subjt:  KWVEAASYKSVTKQAVVKFI

SwissProt top hitse value%identityAlignment
P54164 Uncharacterized protein YpeP1.3e-0534.83Show/hide
Query:  TNNMAEYEACSMGVRMAYEMKVKQ--LRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSI----TFEHVPRESNQVADALA
        TNN AEY A    +R   E+   +  + + GDSL+V++QL+G W   D     +N+++  I    +S+    T+E + R+ NQ AD LA
Subjt:  TNNMAEYEACSMGVRMAYEMKVKQ--LRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSI----TFEHVPRESNQVADALA

P64956 Uncharacterized protein Mb2253c1.4e-0733.33Show/hide
Query:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYS--EEVQ
        TNN+AEY     G+  A ++   +  VL DS LVV Q++G W+ +   L+      + +A  F  I +E VPR  N  AD LA   AM   A S   +  
Subjt:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYS--EEVQ

Query:  PIRMEKYKTPS
        P ++   ++P+
Subjt:  PIRMEKYKTPS

P9WLH4 Uncharacterized protein MT22871.4e-0733.33Show/hide
Query:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYS--EEVQ
        TNN+AEY     G+  A ++   +  VL DS LVV Q++G W+ +   L+      + +A  F  I +E VPR  N  AD LA   AM   A S   +  
Subjt:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYS--EEVQ

Query:  PIRMEKYKTPS
        P ++   ++P+
Subjt:  PIRMEKYKTPS

P9WLH5 Bifunctional protein Rv2228c1.4e-0733.33Show/hide
Query:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYS--EEVQ
        TNN+AEY     G+  A ++   +  VL DS LVV Q++G W+ +   L+      + +A  F  I +E VPR  N  AD LA   AM   A S   +  
Subjt:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVAYS--EEVQ

Query:  PIRMEKYKTPS
        P ++   ++P+
Subjt:  PIRMEKYKTPS

Q9HSF6 Ribonuclease HI1.6e-0839.76Show/hide
Query:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALA
        TNN AEY+A    +  A +     + + GDS LV  QL G W+T D  L       R +   FD  +  HVPR +N+ ADALA
Subjt:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALA

Arabidopsis top hitse value%identityAlignment
AT1G24090.1 RNase H family protein8.3e-0834.88Show/hide
Query:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLS
        TNN AEY A  +G++ A E   K ++V GDS LV  Q+ G+W+     L   +   + +     S    HV R  N  AD  A L+
Subjt:  TNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLS

AT3G01410.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-1137.36Show/hide
Query:  DCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMF
        + TNN+AEY A  +G+R A +   K + VLGDS+LV  Q+ G W+T   K+       + +  +F +   +H+ RE N  AD  A  SA+F
Subjt:  DCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMF

AT3G01410.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-1137.36Show/hide
Query:  DCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMF
        + TNN+AEY A  +G+R A +   K + VLGDS+LV  Q+ G W+T   K+       + +  +F +   +H+ RE N  AD  A  SA+F
Subjt:  DCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGCACCAATAACATGGCTGAGTATGAGGCATGTAGTATGGGAGTGCGAATGGCATACGA
GATGAAAGTAAAACAATTACGAGTCCTTGGGGACTCCCTGTTGGTTGTACATCAGCTGAATGGGGAATGGGAGACAAGGGATGCTAAATTGATCCCTTATAACGATTATA
TTCGCACAATAGCGCAAACTTTTGATTCAATAACTTTTGAACACGTCCCACGCGAAAGCAATCAGGTTGCAGATGCATTAGCCACTCTTTCTGCCATGTTTAATGTAGCT
TACAGTGAAGAAGTTCAACCCATAAGGATGGAGAAGTATAAGACACCATCCTATTGTATGAGCCTCGAACGGAAACCTGACGGTAAACCTTGGTATCATGATATTAAGCA
CTACATCGCATATCGGGAGTATCCACCAGGGGCATCAGAAAATAGTAAGCGCACCATTAGGAGGCTAGCCATGAACCAAAAAAGTTTGGAAGAAATTCATGAAGGAGTGT
GTGGGACGCATGCAAATGGACACATGATGGCGAGGCAAATTTTACGTGCTGGTTATTTTTGGTTGACCATGGAGTCAGACTGCATCAAATATGTGAGAAGATGCCATAAA
TCCTCTCCATTGCATGTGTTGACGGCTCCATGGCCTTTCTCCATGTGGGGTTTGGATGTAATTGGACCCATTGAGCCAAAGGCATCAAATGGTCATCGATTCATTTTGGT
AGCCATAGATTATTTCACGAAATGGGTAGAGGCTGCTTCCTACAAAAGTGTCACCAAGCAGGCCGTTGTCAAGTTCATATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCCCGATGGGAAGTGGTACCCTTTAACTGCTAAGTTATATTTCGATTGCACCAATAACATGGCTGAGTATGAGGCATGTAGTATGGGAGTGCGAATGGCATACGA
GATGAAAGTAAAACAATTACGAGTCCTTGGGGACTCCCTGTTGGTTGTACATCAGCTGAATGGGGAATGGGAGACAAGGGATGCTAAATTGATCCCTTATAACGATTATA
TTCGCACAATAGCGCAAACTTTTGATTCAATAACTTTTGAACACGTCCCACGCGAAAGCAATCAGGTTGCAGATGCATTAGCCACTCTTTCTGCCATGTTTAATGTAGCT
TACAGTGAAGAAGTTCAACCCATAAGGATGGAGAAGTATAAGACACCATCCTATTGTATGAGCCTCGAACGGAAACCTGACGGTAAACCTTGGTATCATGATATTAAGCA
CTACATCGCATATCGGGAGTATCCACCAGGGGCATCAGAAAATAGTAAGCGCACCATTAGGAGGCTAGCCATGAACCAAAAAAGTTTGGAAGAAATTCATGAAGGAGTGT
GTGGGACGCATGCAAATGGACACATGATGGCGAGGCAAATTTTACGTGCTGGTTATTTTTGGTTGACCATGGAGTCAGACTGCATCAAATATGTGAGAAGATGCCATAAA
TCCTCTCCATTGCATGTGTTGACGGCTCCATGGCCTTTCTCCATGTGGGGTTTGGATGTAATTGGACCCATTGAGCCAAAGGCATCAAATGGTCATCGATTCATTTTGGT
AGCCATAGATTATTTCACGAAATGGGTAGAGGCTGCTTCCTACAAAAGTGTCACCAAGCAGGCCGTTGTCAAGTTCATATGA
Protein sequenceShow/hide protein sequence
MSPDGKWYPLTAKLYFDCTNNMAEYEACSMGVRMAYEMKVKQLRVLGDSLLVVHQLNGEWETRDAKLIPYNDYIRTIAQTFDSITFEHVPRESNQVADALATLSAMFNVA
YSEEVQPIRMEKYKTPSYCMSLERKPDGKPWYHDIKHYIAYREYPPGASENSKRTIRRLAMNQKSLEEIHEGVCGTHANGHMMARQILRAGYFWLTMESDCIKYVRRCHK
SSPLHVLTAPWPFSMWGLDVIGPIEPKASNGHRFILVAIDYFTKWVEAASYKSVTKQAVVKFI