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IVF0013060 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013060
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionPMD domain-containing protein
Genome locationchr02:13200444..13200752
RNA-Seq ExpressionIVF0013060
SyntenyIVF0013060
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048380.1 putative mitochondrial protein [Cucumis melo var. makuwa]8.71e-5991Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
        MVYFTERFLSEVRHLVILSDRNQPREDGLSL+VE PWAGA AD+WPRLDNNS+LPRLSVEIPLSE KS WVLQSSIHNEAPNS RALTLGQ LIEGQTRW
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
KAA0050122.1 hypothetical protein E6C27_scaffold675G001390 [Cucumis melo var. makuwa]2.08e-5597.89Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIE
        MVYFTERFLS VRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNS+RALTLGQCLIE
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIE
KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.35e-5590Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
        MVYFTERFLS VRHLVILSDRNQPREDGLSL+VEKPWAGA AD+WPRLDNNS+LPRLSVEIPLSE KS W+LQSSIHNEAPNS RALTLGQ LIEGQTRW
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
KAA0057574.1 putative mitochondrial protein [Cucumis melo var. makuwa]2.10e-5788Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
        MVYFTERFLS VRHLVILSDRNQPREDGLSL+VEKPWAGA AD+WPRLDNNS+LPRLSVE+PLSE KS WVLQSSIHNEA NS +ALTLGQ LIEGQTRW
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
TYK06377.1 hypothetical protein E5676_scaffold163G00690 [Cucumis melo var. makuwa]1.13e-5597.89Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIE
        MVYFTERFLS VRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNS+RALTLGQCLIE
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIE
TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein3.1e-4590Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
        MVYFTERFLS VRHLVILSDRNQPREDGLSL+VEKPWAGA AD+WPRLDNNS+LPRLSVE+PLSE KS WVLQSSIHNEAPNS RALTLGQ LIEGQTRW
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
A0A5A7TZ08 Putative mitochondrial protein1.8e-4591Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
        MVYFTERFLSEVRHLVILSDRNQPREDGLSL+VE PWAGA AD+WPRLDNNS+LPRLSVEIPLSE KS WVLQSSIHNEAPNS RALTLGQ LIEGQTRW
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
A0A5A7U2Q8 PMD domain-containing protein6.2e-4697.89Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIE
        MVYFTERFLS VRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNS+RALTLGQCLIE
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIE
A0A5A7UET3 Putative mitochondrial protein3.1e-4590Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
        MVYFTERFLS VRHLVILSDRNQPREDGLSL+VEKPWAGA AD+WPRLDNNS+LPRLSVEIPLSE KS W+LQSSIHNEAPNS RALTLGQ LIEGQTRW
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRW
A0A5D3C3H5 PMD domain-containing protein6.2e-4697.89Show/hide
Query:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIE
        MVYFTERFLS VRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNS+RALTLGQCLIE
Subjt:  MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGAACGATTCTTGTCCGAAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAACCCAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATG
GGCTGGCGCTGTTGCAGATTATTGGCCACGCTTAGACAACAACTCAATTCTTCCCAGATTATCCGTGGAGATACCTTTGTCTGAGGAAAAAAGCGTATGGGTCTTGCAAT
CTTCTATCCACAATGAGGCTCCTAATTCTAACAGAGCTCTCACTCTTGGACAATGTTTAATTGAAGGTCAAACACGTTGGGTACTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGAACGATTCTTGTCCGAAGTTCGACACCTCGTAATACTTTCTGATAGAAATCAACCCAGAGAAGATGGACTTAGTCTCCTTGTGGAGAAGCCATG
GGCTGGCGCTGTTGCAGATTATTGGCCACGCTTAGACAACAACTCAATTCTTCCCAGATTATCCGTGGAGATACCTTTGTCTGAGGAAAAAAGCGTATGGGTCTTGCAAT
CTTCTATCCACAATGAGGCTCCTAATTCTAACAGAGCTCTCACTCTTGGACAATGTTTAATTGAAGGTCAAACACGTTGGGTACTGTGA
Protein sequenceShow/hide protein sequence
MVYFTERFLSEVRHLVILSDRNQPREDGLSLLVEKPWAGAVADYWPRLDNNSILPRLSVEIPLSEEKSVWVLQSSIHNEAPNSNRALTLGQCLIEGQTRWVL