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IVF0013113 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013113
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionClassical arabinogalactan protein 9
Genome locationchr07:12291862..12292359
RNA-Seq ExpressionIVF0013113
SyntenyIVF0013113
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053440.1 classical arabinogalactan protein 9 [Cucumis melo var. makuwa]3.88e-3961.24Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP              P   P      P      +SP     
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL

Query:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
                +      +    S             NVPT+SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
Subjt:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

TYK14854.1 vegetative cell wall protein gp1 [Cucumis melo var. makuwa]1.37e-3961.8Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP              P   P      P      +SP     
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL

Query:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
                +      +    S             NVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
Subjt:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

XP_008455676.1 PREDICTED: vegetative cell wall protein gp1 [Cucumis melo]4.20e-3861.36Show/hide
Query:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLLHL
        MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP              P   P      P      +SP       
Subjt:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLLHL

Query:  HHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
              +      +    S             NVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
Subjt:  HHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

XP_022929543.1 classical arabinogalactan protein 9-like [Cucurbita moschata]3.85e-2452.27Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPP---------AASPPPATPPPATPPPLPLLQPLHHLLRPHHHHLRASPQLHLLHLHH
        MKMGFQF+M LALFATS MAQAPGAAPAQPP+TPAVPPPSTPPP         AA+PPPATPPPA  PP P   P     +P      ASP         
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPP---------AASPPPATPPPATPPPLPLLQPLHHLLRPHHHHLRASPQLHLLHLHH

Query:  HHHLARLQLRHQRRVQSHLRLRLLHHT--TRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
            +      +    S         +  +    P++SPGP+ PPPPP  NGAA+VSRG+MVGGAVAGA LAM+FA
Subjt:  HHHLARLQLRHQRRVQSHLRLRLLHHT--TRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

XP_022984561.1 classical arabinogalactan protein 4-like [Cucurbita maxima]1.21e-2553.41Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPP---------AASPPPATPPPATPPPLPLLQPLHHLLRPHHHHLRASPQLHLLHLHH
        MKMGFQFVM LALFATS MAQAPGAAPAQPP+TPAVPPPSTPPP         AA+PPPATPPPA  PP P   P     +P      ASP         
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPP---------AASPPPATPPPATPPPLPLLQPLHHLLRPHHHHLRASPQLHLLHLHH

Query:  HHHLARLQLRHQRRVQSHLRLRLLHHT--TRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
            +      +    S         +  +   VP++SPGP+ PPPPP  NGAA+VSRG+MVGGAVAGA LAM+FA
Subjt:  HHHLARLQLRHQRRVQSHLRLRLLHHT--TRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

TrEMBL top hitse value%identityAlignment
A0A0A0L0L1 Uncharacterized protein7.8e-3060.67Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP              P   P      P      +SP     
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL

Query:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
                +      +    S             NVPT+SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAM+FA
Subjt:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

A0A1S3C1K1 vegetative cell wall protein gp13.9e-2961.36Show/hide
Query:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLLHL
        MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP              P   P      P      +SP       
Subjt:  MGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLLHL

Query:  HHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
              +      +    S             NVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
Subjt:  HHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

A0A5A7UE17 Classical arabinogalactan protein 95.9e-3061.24Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP              P   P      P      +SP     
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL

Query:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
                +      +    S             NVPT+SPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
Subjt:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

A0A5D3CV77 Vegetative cell wall protein gp12.7e-3061.8Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL
        MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPP              P   P      P      +SP     
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPL-------------PLLQPLHHLLRPHHHHLRASPQLHLL

Query:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
                +      +    S             NVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
Subjt:  HLHHHHHLARLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

A0A6J1J5L5 classical arabinogalactan protein 4-like1.1e-1853.25Show/hide
Query:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPP----PAASPPPATPPPATPPPLPLLQPLHHLLRPHHHHLRASPQLHLLHLHHHHHLA
        MKMGFQFVM LALFATS MAQAPGAAPAQPP+TPAVPPPSTPP    PA  PP ATPPPATPPP     P      P      + P              
Subjt:  MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPP----PAASPPPATPPPATPPPLPLLQPLHHLLRPHHHHLRASPQLHLLHLHHHHHLA

Query:  RLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA
                   +          +   VP++SPGP+ PPPPP  NGAA+VSRG+MVGGAVAGA LAM+FA
Subjt:  RLQLRHQRRVQSHLRLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGGTTTCCAATTTGTAATGTTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAAGCTCCAGGTGCTGCTCCGGCTCAGCCACCCTCCACCCCCGCCGTCCC
TCCCCCGTCTACTCCTCCCCCAGCAGCATCCCCACCTCCCGCCACCCCTCCTCCAGCAACCCCACCACCGCTACCCCTCCTCCAGCCACTCCACCACCTGCTTCGACCCC
ACCATCATCACCTCCGAGCCAGCCCCCAGCTTCACCTCCTACATCTCCACCACCATCATCACCTAGCTCGCCTCCAACTGCGCCACCAAAGGAGGGTCCAATCTCACCTC
CGACTTCGTCTCCTCCATCACACCACCAGAAGGAATGTCCCAACAAGCAGCCCTGGACCAAGCCCACCGCCACCCCCACCGGAAGGAAATGGAGCGGCAAGCGTTAGCCG
AGGAATGATGGTGGGTGGTGCCGTGGCCGGAGCTTTCTTGGCAATGATATTTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGGGTTTCCAATTTGTAATGTTTTTAGCCTTATTTGCCACTTCTTGTATGGCTCAAGCTCCAGGTGCTGCTCCGGCTCAGCCACCCTCCACCCCCGCCGTCCC
TCCCCCGTCTACTCCTCCCCCAGCAGCATCCCCACCTCCCGCCACCCCTCCTCCAGCAACCCCACCACCGCTACCCCTCCTCCAGCCACTCCACCACCTGCTTCGACCCC
ACCATCATCACCTCCGAGCCAGCCCCCAGCTTCACCTCCTACATCTCCACCACCATCATCACCTAGCTCGCCTCCAACTGCGCCACCAAAGGAGGGTCCAATCTCACCTC
CGACTTCGTCTCCTCCATCACACCACCAGAAGGAATGTCCCAACAAGCAGCCCTGGACCAAGCCCACCGCCACCCCCACCGGAAGGAAATGGAGCGGCAAGCGTTAGCCG
AGGAATGATGGTGGGTGGTGCCGTGGCCGGAGCTTTCTTGGCAATGATATTTGCTTAG
Protein sequenceShow/hide protein sequence
MKMGFQFVMFLALFATSCMAQAPGAAPAQPPSTPAVPPPSTPPPAASPPPATPPPATPPPLPLLQPLHHLLRPHHHHLRASPQLHLLHLHHHHHLARLQLRHQRRVQSHL
RLRLLHHTTRRNVPTSSPGPSPPPPPPEGNGAASVSRGMMVGGAVAGAFLAMIFA