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IVF0013121 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013121
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr03:6398998..6399201
RNA-Seq ExpressionIVF0013121
SyntenyIVF0013121
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031930.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.31e-0571.43Show/hide
Query:  CP--HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        CP  +VDA   T DAA  RQRRPMA RARGTQKKDGR RL L
Subjt:  CP--HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

KAA0052783.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]8.66e-0550Show/hide
Query:  HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL---------WLPVGEV
        ++D   +T D   PRQRRPMAGRA  TQKKDGR R+ L         WL  GE+
Subjt:  HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL---------WLPVGEV

KAA0066232.1 transposase [Cucumis melo var. makuwa]1.90e-0985.29Show/hide
Query:  MACPHVDASTVTADAAPPRQRRPMAGRARGTQKK
        MACP+VDA   TADAAPPRQRRPMAGRARGT+KK
Subjt:  MACPHVDASTVTADAAPPRQRRPMAGRARGTQKK

KAA0067956.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]1.19e-1281.82Show/hide
Query:  MACP--HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        MACP  +VDAS  TADA PPRQ+RPMAGRARGTQKK+GRGRLSL
Subjt:  MACP--HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

TYK17960.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.22e-0673.68Show/hide
Query:  HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        +VDA   T D   PRQRRPMAGRARGTQKKDGR RL L
Subjt:  HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

TrEMBL top hitse value%identityAlignment
A0A5A7VD11 Transposase1.9e-0685.29Show/hide
Query:  MACPHVDASTVTADAAPPRQRRPMAGRARGTQKK
        MACP+VDA   TADAAPPRQRRPMAGRARGT+KK
Subjt:  MACPHVDASTVTADAAPPRQRRPMAGRARGTQKK

A0A5A7VN13 NBS-LRR type resistance protein5.2e-0981.82Show/hide
Query:  MACP--HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        MACP  +VDAS  TADA PPRQ+RPMAGRARGTQKK+GRGRLSL
Subjt:  MACP--HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

A0A5D3D2P4 Retrovirus-related Pol polyprotein from transposon TNT 1-942.3e-0473.68Show/hide
Query:  HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL
        +VDA   T D   PRQRRPMAGRARGTQKKDGR RL L
Subjt:  HVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGCCCTCACGTCGATGCTAGTACGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCG
TGGACGGCTATCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAGAAACGGCGGTCGTCGAAGGCGCACGGACGGAAGGAGAAAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGCCCTCACGTCGATGCTAGTACGGTGACAGCCGACGCCGCACCACCGAGGCAGAGACGGCCGATGGCTGGCCGTGCACGCGGAACCCAGAAGAAGGACGGTCG
TGGACGGCTATCGCTGTGGCTTCCCGTCGGTGAGGTGCGGATGGAGAGAAACGGCGGTCGTCGAAGGCGCACGGACGGAAGGAGAAAAGAATGA
Protein sequenceShow/hide protein sequence
MACPHVDASTVTADAAPPRQRRPMAGRARGTQKKDGRGRLSLWLPVGEVRMERNGGRRRRTDGRRKE