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IVF0013198 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013198
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRetrotransposon protein
Genome locationchr05:11224278..11224445
RNA-Seq ExpressionIVF0013198
SyntenyIVF0013198
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032340.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.14e-31100Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

KAA0048496.1 retrotransposon protein [Cucumis melo var. makuwa]3.14e-2892.73Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDDVY+VDEGDSAYATTTASEDIHYIE KN WSQWRDELAESMFTDW+LRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

KAA0054051.1 retrotransposon protein [Cucumis melo var. makuwa]5.31e-3192.73Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDD+ DVDEGDSAYATTTASEDIHYIET NEWSQWRDELAESMFTDW+LRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

TYK19044.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.59e-31100Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

XP_016899482.1 PREDICTED: uncharacterized protein LOC107990543 [Cucumis melo]1.86e-32100Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

TrEMBL top hitse value%identityAlignment
A0A1S4DU05 uncharacterized protein LOC1079905434.7e-24100Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

A0A5A7SNH9 Putative nuclease HARBI14.7e-24100Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

A0A5A7U2P3 Retrotransposon protein9.9e-2292.73Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDDVY+VDEGDSAYATTTASEDIHYIE KN WSQWRDELAESMFTDW+LRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

A0A5D3BDZ0 Retrotransposon protein1.3e-2192.73Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDD+ DVDEGDSAYATTTASEDIHYIET NEWSQWRDELAESMFTDW+LRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

A0A5D3D656 Putative nuclease HARBI14.7e-24100Show/hide
Query:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
        MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA
Subjt:  MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATATTGCGACGACGTTTACGATGTGGACGAGGGGGATTCTGCATACGCGACAACTACTGCTTCAGAAGACATCCACTACATTGAGACGAAAAACGAGTGGTCTCA
GTGGCGTGATGAACTAGCCGAATCGATGTTCACAGATTGGAAGTTGCGTAACGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACATATTGCGACGACGTTTACGATGTGGACGAGGGGGATTCTGCATACGCGACAACTACTGCTTCAGAAGACATCCACTACATTGAGACGAAAAACGAGTGGTCTCA
GTGGCGTGATGAACTAGCCGAATCGATGTTCACAGATTGGAAGTTGCGTAACGCTTAG
Protein sequenceShow/hide protein sequence
MTYCDDVYDVDEGDSAYATTTASEDIHYIETKNEWSQWRDELAESMFTDWKLRNA