; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

IVF0013208 (gene) of Melon (IVF77) v1 genome

Gene IDIVF0013208
OrganismCucumis melo ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
DescriptionRibosomal protein L2
Genome locationchr12:19926736..19928226
RNA-Seq ExpressionIVF0013208
SyntenyIVF0013208
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002171 - Ribosomal protein L2
IPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEN56111.1 ribosomal protein L2 [Cucumis melo subsp. melo]2.50e-13172.24Show/hide
Query:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP
        MIT STKRQSQEGRALRQFT S GKSAGRNSSGRIT+F L GGS           +TSSMGIV+RIEYDPN SSRIHP+RWIEG          EFAPQP
Subjt:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP

Query:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------
        QIL+  TTTIR LF FSSPP KVDQRK+ASFSP RMA YVV  LPTT+MP WSKSPDTSTRKGAGSKKTCAKDLFFSAFSS+KTKGET+SLSF       
Subjt:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------

Query:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN
            A AKPAFFAP+MREKV+GKKT             ILWAHRMKG+ ALSW  FR QETLGLVGGAEHKESKAER+QGSLP K IGE  KDGACKVN
Subjt:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN

AZP40312.1 ribosomal protein L2 [Cucumis melo var. momordica]4.66e-13264.72Show/hide
Query:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP
        MIT STKRQSQEGRALRQFT S GKSAGRNSSGRIT+F L GGS           +TSSMGIV+RIEYDPN SSRIHP+RWIEG          EFAPQP
Subjt:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP

Query:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------
        QIL+  TTTIR LF FSSPP KVDQRK+ASFSP RMA YVV  LPTT+MP WSKSPDTSTRKGAGSKKTCAKDLFFSAFSS+KTKGET+SLSF       
Subjt:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------

Query:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVNF
            A AKPAFFAP+MREKV+GKKT             ILWAHRMKG+ ALSW  FR QETLGLVGGAEHKESKAER+QGSLP K IGE  KDGACKVN 
Subjt:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVNF

Query:  TREERSNGKAIRPFGSSRTLVEREGLSGRMPMGEEFFKKAITD
                    P  ++  +   +  +G+M M  ++ K + +D
Subjt:  TREERSNGKAIRPFGSSRTLVEREGLSGRMPMGEEFFKKAITD

XP_023521202.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111784913 [Cucurbita pepo subsp. pepo]1.75e-13361.44Show/hide
Query:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP
        MI  ST RQSQEGRALRQFT S GKSAGRNSSGRIT+F   GGS           +TSSMGIV+RIEYDPN SSRI P+RWIEG          EFAP  
Subjt:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP

Query:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------
        +IL+  TTTI  LF FSS P KVDQRK+A FSP ++A YVV  LPT ++P  SKSP TS  KGAGSKKTCAKD+FFSAFSS+KTKGET+SLSF       
Subjt:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------

Query:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVNF
            A A PAFFAP+MREKV+G  T             ILWAHRMK + AL W  FR QET GLVGGAEH ESK E +  SLP K IGE  KDGACKVN 
Subjt:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVNF

Query:  TREERSNGK-AIRPFGSSRTLV-------------------EREGLSGRMPMGEEFFKKAITDSETWDLGFRRNERELFSLSPSVAYVV
        TREERSNGK AIRPFGSSR++                    EREGL GRMPMG  FF+KA  DSETWDLG   NE EL  LSP VAYVV
Subjt:  TREERSNGK-AIRPFGSSRTLV-------------------EREGLSGRMPMGEEFFKKAITDSETWDLGFRRNERELFSLSPSVAYVV

XP_042504770.1 LOW QUALITY PROTEIN: 60S ribosomal protein L2, mitochondrial [Macadamia integrifolia]2.73e-12058.36Show/hide
Query:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG-------------EFA
        MIT  T RQS +GRALRQFT+  GKSAGRNSSGRIT+F   GGS           +TSSMGIV+RIEYDPN SSRI P+RWIEG             EFA
Subjt:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG-------------EFA

Query:  PQPQILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF----
        P  +IL+  TTTIR LF FSS P KVDQRK+A FSP  MA YVV  LPT +MP WSKS     +  AG    CAKD+FFSA SS K KGET+SLSF    
Subjt:  PQPQILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF----

Query:  -------ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACK
               A AKPAFFAP+MREKV+GK T             ILWAHR+K + ALSW  FR QET GLVG AEH ESK + +QGSLP K IGE  KDGACK
Subjt:  -------ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACK

Query:  VNFTREERSNGK-AIRPFGSSRTLV------------------EREGLSGRMPMGEEFFKKAITDSETWDLGFRRNE
        V+ TREERSNGK AIRPFGSSR++                   EREGL GRMPMG  FF+KA  DSETWDLG   NE
Subjt:  VNFTREERSNGK-AIRPFGSSRTLV------------------EREGLSGRMPMGEEFFKKAITDSETWDLGFRRNE

YP_004849339.1 ribosomal protein L2 [Cucumis sativus]1.84e-13071.57Show/hide
Query:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP
        MIT STKRQSQEGRALRQFT S GKSAGRNSSGRIT+F L GGS           +TSSMGIV+RIEYDPN SSRIHP+RWIEG          EFAP+P
Subjt:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP

Query:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------
        QIL+  TTTIR LF FSSPP KVDQRK+ASFSP RMA YVV  LPTT+MP WS+SPDTSTRKGAGSKKTCAKDLFFSAFSS+KTKGET+SLSF       
Subjt:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------

Query:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN
            A AKPAFFAP+MREKV+GKKT             ILWAHRMKG+ ALSW  FR QETLGLVGGAEHKESKAER+QGSLP K IGE  KDGACKVN
Subjt:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN

TrEMBL top hitse value%identityAlignment
A0A200Q8E8 Ribosomal protein L28.9e-8953.88Show/hide
Query:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG-------------EFAPQPQILK
        RQS +GRALRQFT S GKSA RNSSGRIT+F   GGS           +TSSM IV+RIEYDPNCSSRI  +RWIEG             EFAP  +IL+
Subjt:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG-------------EFAPQPQILK

Query:  SITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------
          T TIR LF FSS P KVDQRK+A FSP  MA YVV  LP T+MP WSKS     +  AGSKKTCAKD+FFSA SS K KGET+SLSF           
Subjt:  SITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------

Query:  ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKV------
        A AKPAFFAP+MREK++GK T             ILWAHR+K + ALSW  FR QETLGLVG AEH ESK + +QGSLP K IGE  KDGACKV      
Subjt:  ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKV------

Query:  -----NFTREERSNGKAIRPFG-----------------------SSRTLVEREGLSGRMPMGEEFFKKAITDSETWDLGFRRNERELFSLSPSVAYVV
             NF R   SN  A    G                        +++  EREGL GRMPMG  FF+KA  DSETWDLG   NE +L  LSP  AYVV
Subjt:  -----NFTREERSNGKAIRPFG-----------------------SSRTLVEREGLSGRMPMGEEFFKKAITDSETWDLGFRRNERELFSLSPSVAYVV

A0A3S9JIH9 Ribosomal protein L24.4e-10472.24Show/hide
Query:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP
        MIT STKRQSQEGRALRQFT S GKSAGRNSSGRIT+F L GGS           +TSSMGIV+RIEYDPN SSRIHP+RWIEG          EFAPQP
Subjt:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP

Query:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------
        QIL+  TTTIR LF FSSPP KVDQRK+ASFSP RMA YVV  LPTT+MP WSKSPDTSTRKGAGSKKTCAKDLFFSAFSS+KTKGET+SLSF       
Subjt:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------

Query:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN
            A AKPAFFAP+MREKV+GKKT             ILWAHRMKG+ ALSW  FR QETLGLVGGAEHKESKAER+QGSLP K IGE  KDGACKVN
Subjt:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN

A0A7D5XZ32 Ribosomal protein L25.8e-8866.1Show/hide
Query:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQPQILKSIT
        RQSQEGRALRQFT S GKSAGRNSSGRIT+F   GGS           +TSSMGIV+RIEYDPN SSRI P+RWIEG          EFAP  +IL+  T
Subjt:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQPQILKSIT

Query:  TTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------ARA
        TTIR LF FSSPP KVDQRK+A FSP  MA YVV  LP T+MP WSKSP TST KGAGSKKTCAKD+FFSAFSS+KTKGET+SLSF           A A
Subjt:  TTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------ARA

Query:  KPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN
        KPAFFAP+MREK++GK T             ILWAHRMK + ALSW  FR QETLGLVGGAEH ESK E +QGSLP K IGE  KDGACKVN
Subjt:  KPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN

G3EIZ1 Ribosomal protein L22.8e-10371.57Show/hide
Query:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP
        MIT STKRQSQEGRALRQFT S GKSAGRNSSGRIT+F L GGS           +TSSMGIV+RIEYDPN SSRIHP+RWIEG          EFAP+P
Subjt:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP

Query:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------
        QIL+  TTTIR LF FSSPP KVDQRK+ASFSP RMA YVV  LPTT+MP WS+SPDTSTRKGAGSKKTCAKDLFFSAFSS+KTKGET+SLSF       
Subjt:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------

Query:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN
            A AKPAFFAP+MREKV+GKKT             ILWAHRMKG+ ALSW  FR QETLGLVGGAEHKESKAER+QGSLP K IGE  KDGACKVN
Subjt:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN

G3EU27 Ribosomal protein L24.4e-10472.24Show/hide
Query:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP
        MIT STKRQSQEGRALRQFT S GKSAGRNSSGRIT+F L GGS           +TSSMGIV+RIEYDPN SSRIHP+RWIEG          EFAPQP
Subjt:  MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQP

Query:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------
        QIL+  TTTIR LF FSSPP KVDQRK+ASFSP RMA YVV  LPTT+MP WSKSPDTSTRKGAGSKKTCAKDLFFSAFSS+KTKGET+SLSF       
Subjt:  QILKSITTTIRDLFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-------

Query:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN
            A AKPAFFAP+MREKV+GKKT             ILWAHRMKG+ ALSW  FR QETLGLVGGAEHKESKAER+QGSLP K IGE  KDGACKVN
Subjt:  ----ARAKPAFFAPQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGEESKDGACKVN

SwissProt top hitse value%identityAlignment
P0C8K6 60S ribosomal protein L2, mitochondrial1.1e-3539.62Show/hide
Query:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEGEFAPQPQILKSITTTIRDLFLFS
        RQS +GRALR FT S GKSAGRNSSGRIT+F   GGS           +TSS+GIV+RIEYDPN SSRI  +RWIEG    + +  K    TI +  L  
Subjt:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEGEFAPQPQILKSITTTIRDLFLFS

Query:  SPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------ARAKPAFFAPQMR
          P K+ +   A+        + +FS                                FS+ SS   +GET+SLSF           A AKPAFFA +MR
Subjt:  SPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------ARAKPAFFAPQMR

Query:  EKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGS-LPVKSIGEESKDGACKVNFTREERSNGKAIRPFGS
        EK  GKKT             +LWAHR+K + ALSW   R Q+TL LVG AEH ESK + +QGS LP + +      G  + ++    RS  KA+ P  +
Subjt:  EKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGS-LPVKSIGEESKDGACKVNFTREERSNGKAIRPFGS

Query:  SRTLVEREGLSGRMPMGE
        SR       L  + P+GE
Subjt:  SRTLVEREGLSGRMPMGE

P26859 60S ribosomal protein L2, mitochondrial1.2e-1335.57Show/hide
Query:  EGRALRQFTWSIGK-SAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEGEFAPQPQILKSITTTIRD--------
        +G+AL+Q T+ + + SAGRNSSGRIT+F   GGS           +TSSMGIV+RIEYDPN SS I  +RWIEG   P  ++  S   + R+        
Subjt:  EGRALRQFTWSIGK-SAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEGEFAPQPQILKSITTTIRD--------

Query:  LFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSFARAKPAFFAPQMR
        LF FSS P +  + K       R    ++ S        W            G++   AK++      S        S++ A AKPAFFA +M+
Subjt:  LFLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSFARAKPAFFAPQMR

P92812 60S ribosomal protein L2, mitochondrial1.1e-3539.62Show/hide
Query:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEGEFAPQPQILKSITTTIRDLFLFS
        RQS +GRALR FT S GKSAGRNSSGRIT+F   GGS           +TSS+GIV+RIEYDPN SSRI  +RWIEG    + +  K    TI +  L  
Subjt:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEGEFAPQPQILKSITTTIRDLFLFS

Query:  SPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------ARAKPAFFAPQMR
          P K+ +   A+        + +FS                                FS+ SS   +GET+SLSF           A AKPAFFA +MR
Subjt:  SPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------ARAKPAFFAPQMR

Query:  EKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGS-LPVKSIGEESKDGACKVNFTREERSNGKAIRPFGS
        EK  GKKT             +LWAHR+K + ALSW   R Q+TL LVG AEH ESK + +QGS LP + +      G  + ++    RS  KA+ P  +
Subjt:  EKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGS-LPVKSIGEESKDGACKVNFTREERSNGKAIRPFGS

Query:  SRTLVEREGLSGRMPMGE
        SR       L  + P+GE
Subjt:  SRTLVEREGLSGRMPMGE

P93311 60S ribosomal protein L2, mitochondrial4.1e-6753.54Show/hide
Query:  RALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQPQILKSITTTIRDL
        RALRQFT S GKSAGRNSSGRIT+F   GGS           +TSSMGIV+ IEYDPN SS+I P+RWI+G          +FAP  +IL+  T TI  L
Subjt:  RALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQPQILKSITTTIRDL

Query:  FLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSFAR-----------AKPAFFA
        F FS  P KVD+RK+A FSP  MA YVV  LP T MP  S S      KGAGS KT  KD+FFSAFSS K K ET+SL+FA            AKPAFFA
Subjt:  FLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSFAR-----------AKPAFFA

Query:  PQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGE-----------ESKDGACKVN
        P+MR+KV+GK T             ILWAHR+KG+  LSW  FR Q+TLGLVG A HK+SK + +QG+LP K IGE            +KDGACKV+
Subjt:  PQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGE-----------ESKDGACKVN

Q2F969 60S ribosomal protein L2, mitochondrial1.1e-3539.62Show/hide
Query:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEGEFAPQPQILKSITTTIRDLFLFS
        RQS +GRALR FT S GKSAGRNSSGRIT+F   GGS           +TSS+GIV+RIEYDPN SSRI  +RWIEG    + +  K    TI +  L  
Subjt:  RQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEGEFAPQPQILKSITTTIRDLFLFS

Query:  SPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------ARAKPAFFAPQMR
          P K+ +   A+        + +FS                                FS+ SS   +GET+SLSF           A AKPAFFA +MR
Subjt:  SPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSF-----------ARAKPAFFAPQMR

Query:  EKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGS-LPVKSIGEESKDGACKVNFTREERSNGKAIRPFGS
        EK  GKKT             +LWAHR+K + ALSW   R Q+TL LVG AEH ESK + +QGS LP + +      G  + ++    RS  KA+ P  +
Subjt:  EKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGS-LPVKSIGEESKDGACKVNFTREERSNGKAIRPFGS

Query:  SRTLVEREGLSGRMPMGE
        SR       L  + P+GE
Subjt:  SRTLVEREGLSGRMPMGE

Arabidopsis top hitse value%identityAlignment
AT2G07715.1 Nucleic acid-binding, OB-fold-like protein1.2e-9054.3Show/hide
Query:  RALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQPQILKSITTTIRDL
        RALRQFT S GKSAGRNSSGRIT+F   GGS           +TSSMGIV+ IEYDPN SS+I P+RWI+G          +FAP  +IL+  T TI  L
Subjt:  RALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQPQILKSITTTIRDL

Query:  FLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSFAR-----------AKPAFFA
        F FS  P KVD+RK+A FSP  MA YVV  LP T MP  S S      KGAGS KT  KD+FFSAFSS K K ET+SL+FA            AKPAFFA
Subjt:  FLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSFAR-----------AKPAFFA

Query:  PQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGE-----------ESKDGACKVNFTR
        P+MR+KV+GK T             ILWAHR+KG+  LSW  FR Q+TLGLVG A HK+SK + +QG+LP K IGE            +KDGACKV+ TR
Subjt:  PQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGE-----------ESKDGACKVNFTR

Query:  EERSNGKAIRPFGSSRTL-------------------VEREGLSGRMPMGEEFFKKAITDSETWDLGFRRNE
        EERSNGKAIRPFGSSR++                    EREGL GRMPMG  FF+KA  DSETWDLG   NE
Subjt:  EERSNGKAIRPFGSSRTL-------------------VEREGLSGRMPMGEEFFKKAITDSETWDLGFRRNE

ATMG00560.1 Nucleic acid-binding, OB-fold-like protein2.9e-6853.54Show/hide
Query:  RALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQPQILKSITTTIRDL
        RALRQFT S GKSAGRNSSGRIT+F   GGS           +TSSMGIV+ IEYDPN SS+I P+RWI+G          +FAP  +IL+  T TI  L
Subjt:  RALRQFTWSIGKSAGRNSSGRITIFCLRGGS-----------NTSSMGIVKRIEYDPNCSSRIHPIRWIEG----------EFAPQPQILKSITTTIRDL

Query:  FLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSFAR-----------AKPAFFA
        F FS  P KVD+RK+A FSP  MA YVV  LP T MP  S S      KGAGS KT  KD+FFSAFSS K K ET+SL+FA            AKPAFFA
Subjt:  FLFSSPPEKVDQRKIASFSPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSFAR-----------AKPAFFA

Query:  PQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGE-----------ESKDGACKVN
        P+MR+KV+GK T             ILWAHR+KG+  LSW  FR Q+TLGLVG A HK+SK + +QG+LP K IGE            +KDGACKV+
Subjt:  PQMREKVKGKKT-------------ILWAHRMKGQVALSWLCFRWQETLGLVGGAEHKESKAERNQGSLPVKSIGE-----------ESKDGACKVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACGACCTCGACAAAGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTGGAGTATAGGAAAGTCCGCTGGTAGGAATTCCTCAGGGCGTATTACTAT
TTTTTGCCTCAGGGGTGGATCGAACACTTCGTCTATGGGCATTGTGAAGAGAATTGAATATGACCCTAATTGTTCTTCTCGGATCCATCCAATACGATGGATTGAGGGGG
AATTCGCTCCTCAGCCTCAGATCCTCAAATCTATCACAACCACCATCCGCGACCTATTTTTGTTCTCTTCCCCACCCGAGAAGGTGGATCAAAGAAAGATAGCTTCCTTC
TCTCCTGAACGGATGGCGACTTATGTAGTGTTCAGCCTTCCTACCACCAAGATGCCTCATTGGTCGAAGAGCCCCGATACTAGTACTAGGAAGGGCGCAGGAAGCAAAAA
AACTTGCGCGAAGGACCTTTTCTTCTCTGCCTTCTCCTCTAAAAAAACCAAGGGAGAGACATCATCCCTTTCCTTCGCTAGGGCAAAGCCCGCTTTCTTCGCTCCGCAAA
TGAGAGAGAAAGTCAAAGGAAAAAAGACCATTCTCTGGGCACATAGGATGAAAGGTCAAGTTGCCCTTTCTTGGTTGTGTTTTAGGTGGCAAGAGACTTTAGGGCTTGTT
GGAGGTGCTGAGCATAAGGAATCGAAAGCAGAGAGGAATCAAGGTAGCTTACCTGTCAAGTCGATAGGCGAAGAGTCGAAGGATGGAGCATGCAAAGTCAATTTCACACG
GGAAGAGAGGTCAAATGGCAAGGCCATACGCCCATTTGGCTCATCGCGGACTTTGGTAGAAAGGGAAGGCCTGTCAGGTCGTATGCCCATGGGTGAAGAATTCTTCAAAA
AAGCGATAACTGACTCGGAGACTTGGGACCTTGGCTTTAGAAGGAATGAAAGGGAGCTCTTCTCGCTTTCTCCATCAGTGGCTTATGTAGTAGAAAGGCCAACGACTATA
CAGACTCTATACCAAGTCATGGAGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTACGACCTCGACAAAGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTGGAGTATAGGAAAGTCCGCTGGTAGGAATTCCTCAGGGCGTATTACTAT
TTTTTGCCTCAGGGGTGGATCGAACACTTCGTCTATGGGCATTGTGAAGAGAATTGAATATGACCCTAATTGTTCTTCTCGGATCCATCCAATACGATGGATTGAGGGGG
AATTCGCTCCTCAGCCTCAGATCCTCAAATCTATCACAACCACCATCCGCGACCTATTTTTGTTCTCTTCCCCACCCGAGAAGGTGGATCAAAGAAAGATAGCTTCCTTC
TCTCCTGAACGGATGGCGACTTATGTAGTGTTCAGCCTTCCTACCACCAAGATGCCTCATTGGTCGAAGAGCCCCGATACTAGTACTAGGAAGGGCGCAGGAAGCAAAAA
AACTTGCGCGAAGGACCTTTTCTTCTCTGCCTTCTCCTCTAAAAAAACCAAGGGAGAGACATCATCCCTTTCCTTCGCTAGGGCAAAGCCCGCTTTCTTCGCTCCGCAAA
TGAGAGAGAAAGTCAAAGGAAAAAAGACCATTCTCTGGGCACATAGGATGAAAGGTCAAGTTGCCCTTTCTTGGTTGTGTTTTAGGTGGCAAGAGACTTTAGGGCTTGTT
GGAGGTGCTGAGCATAAGGAATCGAAAGCAGAGAGGAATCAAGGTAGCTTACCTGTCAAGTCGATAGGCGAAGAGTCGAAGGATGGAGCATGCAAAGTCAATTTCACACG
GGAAGAGAGGTCAAATGGCAAGGCCATACGCCCATTTGGCTCATCGCGGACTTTGGTAGAAAGGGAAGGCCTGTCAGGTCGTATGCCCATGGGTGAAGAATTCTTCAAAA
AAGCGATAACTGACTCGGAGACTTGGGACCTTGGCTTTAGAAGGAATGAAAGGGAGCTCTTCTCGCTTTCTCCATCAGTGGCTTATGTAGTAGAAAGGCCAACGACTATA
CAGACTCTATACCAAGTCATGGAGCGATAG
Protein sequenceShow/hide protein sequence
MITTSTKRQSQEGRALRQFTWSIGKSAGRNSSGRITIFCLRGGSNTSSMGIVKRIEYDPNCSSRIHPIRWIEGEFAPQPQILKSITTTIRDLFLFSSPPEKVDQRKIASF
SPERMATYVVFSLPTTKMPHWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSKKTKGETSSLSFARAKPAFFAPQMREKVKGKKTILWAHRMKGQVALSWLCFRWQETLGLV
GGAEHKESKAERNQGSLPVKSIGEESKDGACKVNFTREERSNGKAIRPFGSSRTLVEREGLSGRMPMGEEFFKKAITDSETWDLGFRRNERELFSLSPSVAYVVERPTTI
QTLYQVMER